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SCNpilot_cont_750_bf_scaffold_929

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_929_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1683
DNA (1683bp) protein (561aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSG8_LEIAQ
DNA-directed RNA polymerase subunit beta
SCNpilot_cont_750_bf_scaffold_929_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1733..5332
DNA (3600bp) protein (1200aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1Z9_LEIAQ
SCNpilot_cont_750_bf_scaffold_929_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5493..5723
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9V8_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71482.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_929_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5928..7592
DNA (1665bp) protein (555aa)
Putative type 4 fimbrial assembly protein PilB (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RC06_LEIAQ rbh
Putative type 4 fimbrial assembly protein PilB {ECO:0000313|EMBL:ERK72780.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB
SCNpilot_cont_750_bf_scaffold_929_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7601..9244
DNA (1644bp) protein (548aa)
Twitching motility protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW73_LEIAQ rbh
Twitching motility protein {ECO:0000313|EMBL:ERK72779.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
twitching motility protein
SCNpilot_cont_750_bf_scaffold_929_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9244..10470
DNA (1227bp) protein (409aa)
Putative type IV fimbrial assembly protein PilC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5K5_LEIAQ rbh
Putative type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:ERK72778.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type II secretory pathway, component PulF; K02653 type IV pilus assembly protein PilC
SCNpilot_cont_750_bf_scaffold_929_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10646..11119
DNA (474bp) protein (158aa)
Fimbrial family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDI9_LEIAQ
Fimbrial family protein {ECO:0000313|EMBL:ERK72777.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
secretory protein
SCNpilot_cont_750_bf_scaffold_929_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11217..12605
DNA (1389bp) protein (463aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVG9_LEIAQ rbh
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERK72776.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
mucin-2-like
SCNpilot_cont_750_bf_scaffold_929_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12605..13336
DNA (732bp) protein (244aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RC01_LEIAQ rbh
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERK72775.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_bf_scaffold_929_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13333..15099
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RW68_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72774.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_929_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15096..15935
DNA (840bp) protein (280aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
prepilin signal peptidase PulO-like peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5J9_LEIAQ rbh
SCNpilot_cont_750_bf_scaffold_929_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15955..17004
DNA (1050bp) protein (350aa)
Cell division protein FtsA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDI5_LEIAQ rbh
Cell division protein FtsA {ECO:0000313|EMBL:ERK72772.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
SCNpilot_cont_750_bf_scaffold_929_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17001..17840
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVG2_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72771.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Fimbrial assembly family protein
SCNpilot_cont_750_bf_scaffold_929_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17843..18592
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RBZ6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72770.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_929_15
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18688..19839
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P6S0_LEIXC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40622.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_929_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19850..20344
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTZ9_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72009.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_929_17
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20682..21056
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=2 Tax=Leifsonia RepID=RS12_LEIXX
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_750_bf_scaffold_929_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21056..21526
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBE6_LEIAQ rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 rbh
SCNpilot_cont_750_bf_scaffold_929_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21629..23743
DNA (2115bp) protein (705aa)
Elongation factor G n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTA2_LEIAQ rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
elongation factor G rbh
SCNpilot_cont_750_bf_scaffold_929_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23856..24101
DNA (246bp) protein (82aa)
elongation factor Tu n=1 Tax=Microbacterium sp. B19 RepID=UPI00034980FD
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Displaying 20 items

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