name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_200_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..286)
|
Cell cycle transcriptional regulator CtrA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI46_NITHX
transcriptional regulatory protein; K13584 two-component system, cell cycle response regulator CtrA
Two-component response regulator {ECO:0000313|EMBL:BAL12896.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
655..1980
|
ATP synthase n=1 Tax=Afipia birgiae RepID=UPI000307DECF
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:EKS36758.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2089..2508
|
Flagellar export FliJ n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YN1_RHOPB
flagellar export FliJ
Flagellar export FliJ {ECO:0000313|EMBL:ABD89755.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2698..3246
|
Sigma-24 (FecI-like) n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YN4_RHOPB
rbh
FecI-like sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
rbh
Sigma-24 (FecI-like) {ECO:0000313|EMBL:ABD89752.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3243..4088
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132U8_RHOPS
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE40891.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4279..4476)
|
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SV96_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03795.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4787..6922)
|
Flagellar biosynthesis protein FlhA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI50_NITHX
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABE64097.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7214..8461
|
Haloacetate dehalogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5W8_9BRAD
Haloacetate dehalogenase {ECO:0000313|EMBL:ERF79856.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator transporter
|
|
SCNpilot_cont_750_bf_scaffold_200_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9341..10006
|
TetR family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D3AC0
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGW90982.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_10
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10136..11320
|
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ZT3_CUPPJ
rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AAZ61350.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_11
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11332..12150
|
h16_A2256; ABC transporter ATPase (EC:3.6.3.22); K01995 branched-chain amino acid transport system ATP-binding protein
rbh
ABC transporter ATPase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XLH7_9RALS
rbh
ABC transporter ATPase {ECO:0000313|EMBL:EON20146.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_12
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12143..12877
|
ABC transporter ATP-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IYG7_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESJ19845.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_13
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12888..13907
|
ABC transporter permease n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J386_9BURK
ABC transporter permease {ECO:0000313|EMBL:ESJ19844.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
h16_A2254; ABC-type transporter, permease component; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_cont_750_bf_scaffold_200_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13904..14998
|
ABC-type transporter, permease component n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SCI1_9BURK
rbh
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19917.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_15
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14998..16512
|
Acyl-CoA synthetase {ECO:0000313|EMBL:CAJ93349.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAJ93349.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Acyl-CoA synthetase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XM76_9RALS
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16496..17356
|
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA76_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39512.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18039..19217
|
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X2_9BRAD
Leu/Ile/Val/Thr-binding protein {ECO:0000313|EMBL:CEG06758.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
extracellular ligand-binding receptor protein
|
|
SCNpilot_cont_750_bf_scaffold_200_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19364..21430
|
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X3_9BRAD
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI52653.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
methyl-accepting chemotaxis sensory transducer
|
|
SCNpilot_cont_750_bf_scaffold_200_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22388..23929
|
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Homodimeric glycerol 3-phosphate dehydrogenase (Quinone) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA9_NITHX
|
|
SCNpilot_cont_750_bf_scaffold_200_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23926..25005
|
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219L2_RHOPB
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD86924.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25017..26102
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDR6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36498.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative ATP-binding protein of sugar ABC transporter
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_22
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26102..27004
|
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372670E
rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
rbh
Multiple sugar transport system permease {ECO:0000313|EMBL:ERF86319.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27004..27810
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RV0_RHOP5
rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABJ05334.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_24
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27822..28148
|
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA169E
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91625.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28220..29140
|
Extracellular solute-binding protein, family 1 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISA8_RHOP2
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABD08902.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_cont_750_bf_scaffold_200_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29137..29943
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6W5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36494.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
|
|
SCNpilot_cont_750_bf_scaffold_200_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30412..31521
|
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
rbh
Alcohol dehydrogenase class-3 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHB2_9BRAD
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31555..32118
|
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glutathione-dependent formaldehyde-activating enzyme; K03396 S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
rbh
aldehyde-activating protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372C024
rbh
|
|
SCNpilot_cont_750_bf_scaffold_200_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32216..33067
|
S-formylglutathione hydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNJ2_AFIFE
S-formylglutathione hydrolase {ECO:0000313|EMBL:EKS29989.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_cont_750_bf_scaffold_200_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33092..33661)
|
Molecular chaperone GrpE n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GWK4_9BRAD
Molecular chaperone GrpE {ECO:0000313|EMBL:ERF81922.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
|