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SCNpilot_cont_750_bf_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 275 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_200_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..286)
DNA (285bp) protein (95aa)
Cell cycle transcriptional regulator CtrA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI46_NITHX
transcriptional regulatory protein; K13584 two-component system, cell cycle response regulator CtrA
Two-component response regulator {ECO:0000313|EMBL:BAL12896.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_200_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..1980
DNA (1326bp) protein (442aa)
fliI; flagellum-specific ATP synthase; K02412 flagellum-specific ATP synthase [EC:3.6.3.14] rbh
ATP synthase n=1 Tax=Afipia birgiae RepID=UPI000307DECF
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:EKS36758.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_200_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2089..2508
DNA (420bp) protein (140aa)
Flagellar export FliJ n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YN1_RHOPB
flagellar export FliJ
Flagellar export FliJ {ECO:0000313|EMBL:ABD89755.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_200_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2698..3246
DNA (549bp) protein (183aa)
Sigma-24 (FecI-like) n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YN4_RHOPB rbh
FecI-like sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
Sigma-24 (FecI-like) {ECO:0000313|EMBL:ABD89752.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_200_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..4088
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132U8_RHOPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE40891.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_200_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4279..4476)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SV96_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03795.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_200_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4787..6922)
DNA (2136bp) protein (712aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI50_NITHX
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABE64097.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_200_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7214..8461
DNA (1248bp) protein (416aa)
Haloacetate dehalogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5W8_9BRAD
Haloacetate dehalogenase {ECO:0000313|EMBL:ERF79856.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator transporter
SCNpilot_cont_750_bf_scaffold_200_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9341..10006
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D3AC0
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGW90982.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_cont_750_bf_scaffold_200_10
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10136..11320
DNA (1185bp) protein (395aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ZT3_CUPPJ rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AAZ61350.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_750_bf_scaffold_200_11
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..12150
DNA (819bp) protein (273aa)
h16_A2256; ABC transporter ATPase (EC:3.6.3.22); K01995 branched-chain amino acid transport system ATP-binding protein rbh
ABC transporter ATPase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XLH7_9RALS rbh
ABC transporter ATPase {ECO:0000313|EMBL:EON20146.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
SCNpilot_cont_750_bf_scaffold_200_12
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12143..12877
DNA (735bp) protein (245aa)
ABC transporter ATP-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IYG7_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESJ19845.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_200_13
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12888..13907
DNA (1020bp) protein (340aa)
ABC transporter permease n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J386_9BURK
ABC transporter permease {ECO:0000313|EMBL:ESJ19844.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
h16_A2254; ABC-type transporter, permease component; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_200_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13904..14998
DNA (1095bp) protein (365aa)
ABC-type transporter, permease component n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SCI1_9BURK rbh
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19917.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_200_15
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14998..16512
DNA (1515bp) protein (505aa)
h16_A2252; acyl-CoA synthetase (EC:6.2.1.-); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:CAJ93349.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAJ93349.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Acyl-CoA synthetase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XM76_9RALS rbh
SCNpilot_cont_750_bf_scaffold_200_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16496..17356
DNA (861bp) protein (287aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA76_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39512.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_200_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18039..19217
DNA (1179bp) protein (393aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X2_9BRAD
Leu/Ile/Val/Thr-binding protein {ECO:0000313|EMBL:CEG06758.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
extracellular ligand-binding receptor protein
SCNpilot_cont_750_bf_scaffold_200_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19364..21430
DNA (2067bp) protein (689aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X3_9BRAD
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI52653.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
methyl-accepting chemotaxis sensory transducer
SCNpilot_cont_750_bf_scaffold_200_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22388..23929
DNA (1542bp) protein (514aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Homodimeric glycerol 3-phosphate dehydrogenase (Quinone) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPA9_NITHX
SCNpilot_cont_750_bf_scaffold_200_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23926..25005
DNA (1080bp) protein (360aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219L2_RHOPB
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD86924.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_200_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25017..26102
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDR6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36498.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative ATP-binding protein of sugar ABC transporter rbh
SCNpilot_cont_750_bf_scaffold_200_22
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26102..27004
DNA (903bp) protein (301aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372670E rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
Multiple sugar transport system permease {ECO:0000313|EMBL:ERF86319.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_750_bf_scaffold_200_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27004..27810
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RV0_RHOP5 rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABJ05334.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_750_bf_scaffold_200_24
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27822..28148
DNA (327bp) protein (109aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA169E
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91625.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_750_bf_scaffold_200_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28220..29140
DNA (921bp) protein (307aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISA8_RHOP2
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABD08902.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_200_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29137..29943
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6W5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36494.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_200_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30412..31521
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] rbh
Alcohol dehydrogenase class-3 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHB2_9BRAD rbh
SCNpilot_cont_750_bf_scaffold_200_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31555..32118
DNA (564bp) protein (188aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glutathione-dependent formaldehyde-activating enzyme; K03396 S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] rbh
aldehyde-activating protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372C024 rbh
SCNpilot_cont_750_bf_scaffold_200_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32216..33067
DNA (852bp) protein (284aa)
esterase D; K01070 S-formylglutathione hydrolase [EC:3.1.2.12] rbh
S-formylglutathione hydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNJ2_AFIFE
S-formylglutathione hydrolase {ECO:0000313|EMBL:EKS29989.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_750_bf_scaffold_200_30
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33092..33661)
DNA (570bp) protein (190aa)
Molecular chaperone GrpE n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GWK4_9BRAD
Molecular chaperone GrpE {ECO:0000313|EMBL:ERF81922.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
Displaying items 1-30 of 275 in total

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