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SCNpilot_cont_750_bf_scaffold_732

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_732_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

570..1154
DNA (585bp) protein (195aa)
Blr1408 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UK8_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ65868.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_750_bf_scaffold_732_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..1417)
DNA (249bp) protein (83aa)
Type IV pilus assembly PilZ n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136C8_RHOPS
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABE40061.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_732_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2098
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWM6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03315.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_732_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2171..2650)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBR3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37060.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
YbaK/prolyl-tRNA synthetase associated region
SCNpilot_cont_750_bf_scaffold_732_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2687..3427)
DNA (741bp) protein (247aa)
2-haloalkanoic acid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] rbh
haloacid dehalogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037E3261 rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KJC44850.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_750_bf_scaffold_732_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3631..4866
DNA (1236bp) protein (412aa)
acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUM5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86594.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_750_bf_scaffold_732_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4882..6204)
DNA (1323bp) protein (441aa)
O-antigen polymerase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPX7_NITWN
Uncharacterized protein {ECO:0000313|EMBL:KIZ46843.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
O-antigen polymerase
SCNpilot_cont_750_bf_scaffold_732_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6201..7070)
DNA (870bp) protein (290aa)
amidohydrolase n=1 Tax=Afipia birgiae RepID=UPI000366DF8A rbh
Amidohydrolase {ECO:0000313|EMBL:KIZ46842.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
amidohydrolase 2; K07045 rbh
SCNpilot_cont_750_bf_scaffold_732_9
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7157..7558)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000374D946
Uncharacterized protein {ECO:0000313|EMBL:ESQ90563.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_732_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7589..8047)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4QKI9_9CAUL
MarR family transcriptional regulator {ECO:0000313|EMBL:AIB15154.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
regulatory protein, MarR
SCNpilot_cont_750_bf_scaffold_732_11
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8254..8379
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=11 Tax=Bradyrhizobium RepID=RL36_BRADU
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_cont_750_bf_scaffold_732_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8549..9229
DNA (681bp) protein (227aa)
Tetratricopeptide TPR_2 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13BA3_RHOPS rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABE38636.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_732_13
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9397..11787
DNA (2391bp) protein (797aa)
Aliphatic nitrilase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IGB7_9BRAD rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KJC39169.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_732_14
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11870..12832
DNA (963bp) protein (321aa)
alpha/beta hydrolase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003629BB5 rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EHR05924.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative alpha/beta hydrolase rbh
SCNpilot_cont_750_bf_scaffold_732_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12985..13305)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031B8778
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000313|EMBL:ERF81370.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cytochrome c oxidoreductase subunit B
SCNpilot_cont_750_bf_scaffold_732_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13317..14528)
DNA (1212bp) protein (404aa)
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein {ECO:0000313|EMBL:ABE64124.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ABE64124.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI23_NITHX rbh
twin-arginine translocation pathway signal rbh
SCNpilot_cont_750_bf_scaffold_732_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14723..16159)
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZC8_RHOPB rbh
SCNpilot_cont_750_bf_scaffold_732_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16156..16731)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCZ3_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig160, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52222.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_732_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16909..17211
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ9_NITHX
hypothetical protein; K09948 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62048.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_732_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17397..17666
DNA (270bp) protein (90aa)
UPF0335 protein RPC_3979 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Y3979_RHOPB
hypothetical protein
UPF0335 protein RPC_3979 {ECO:0000255|HAMAP-Rule:MF_00797}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_732_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17829..19418)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62050.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_732_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19724..21850)
DNA (2127bp) protein (709aa)
Peptidoglycan-binding domain 1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZD3_RHOPB rbh
peptidoglycan binding domain-containing protein rbh
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:ABD89503.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_732_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22307..23782)
DNA (1476bp) protein (492aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ5_NITHX
two component, sigma54 specific, Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABE62052.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_732_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23936..25831
DNA (1896bp) protein (632aa)
peptidase M3B, oligoendopeptidase-related clade 3; K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
Peptidase M3B, oligoendopeptidase-related clade 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNZ4_NITHX rbh
Peptidase M3B, oligoendopeptidase-related clade 3 {ECO:0000313|EMBL:ABE62053.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_732_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26023..26175
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Bradyrhizobium RepID=G7D8P2_BRAJP
hypothetical protein
Bsl7127 protein {ECO:0000313|EMBL:BAC52392.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_bf_scaffold_732_26
unknown

Not on your lists

26254..26319
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 26 items

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