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SCNpilot_cont_750_bf_scaffold_1895_13

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 49 / 55 MC: 6 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 10108..10437

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 108.0
  • Bit_score: 115
  • Evalue 3.00e-23
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 109.0
  • Bit_score: 117
  • Evalue 1.40e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 109.0
  • Bit_score: 111
  • Evalue 1.80e-22

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTGCCGACCTGGATCAAGGAAGTTCTTGATCACTTCGGCTTGTCAAATCTCGACATTATCCGTGAGCGGTTGTCGCAACTCTTCTCCCAGTTCCTCCAGCTGCTGGTCTCGCATGCGGTCACTGCCGGACAGAGCACGTTTAAGTTCATAGTCGCTCTAGGTGTGATGGTTTATCTGATGTTTTTCCCGTTAAGGGACGGCACGAGTCTGACCCGCCGGATCAAGGATGCCGTTCCGTTACGTCCCGCGCAGCGGGATGAACTCTTCGAAAAGTTCACCATCGTTGTTCGCGCCACCGTCAAGGGTTCGGTGCTCGTGGCCATCCTTTAG
PROTEIN sequence
Length: 110
LPTWIKEVLDHFGLSNLDIIRERLSQLFSQFLQLLVSHAVTAGQSTFKFIVALGVMVYLMFFPLRDGTSLTRRIKDAVPLRPAQRDELFEKFTIVVRATVKGSVLVAIL*