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SCNpilot_cont_750_bf_scaffold_1895

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1895_1
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1326
DNA (1326bp) protein (442aa)
Thioredoxin reductase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TSK0_9MICC
Thioredoxin reductase {ECO:0000313|EMBL:ELT45697.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
thioredoxin reductase
SCNpilot_cont_750_bf_scaffold_1895_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1323..2642
DNA (1320bp) protein (440aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX5_9BRAD rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG62881.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
major facilitator transporter rbh
SCNpilot_cont_750_bf_scaffold_1895_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2614..3120)
DNA (507bp) protein (169aa)
Transposase and inactivated derivatives-like protein n=2 Tax=Sphingomonas aromaticivorans RepID=A4XE74_NOVAD
transposase
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ABP64235.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_750_bf_scaffold_1895_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3174..3560)
DNA (387bp) protein (129aa)
Transposase N-terminus n=1 Tax=Sphingomonas aromaticivorans RepID=O85930_SPHAR
Transposase N-terminus {ECO:0000313|EMBL:AAD03944.1}; TaxID=48935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (Sphingomonas aromaticivorans).;"
transposase
SCNpilot_cont_750_bf_scaffold_1895_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4218..4652
DNA (435bp) protein (145aa)
Putative transposase n=5 Tax=Rhizobium leguminosarum RepID=Q1M7Y5_RHIL3
putative transposase; K07492 putative transposase
Putative transposase {ECO:0000313|EMBL:CAK10392.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_750_bf_scaffold_1895_6
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4918..5721)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF98_METED rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAX24296.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_7
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5731..6552)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF99_METED rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAX24297.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6552..7280)
DNA (729bp) protein (243aa)
ABC transporter, ATPase molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA0_METED rbh
modC; molybdate ABC transporter ATPase rbh
ABC transporter, ATPase molybdate transporter {ECO:0000313|EMBL:CAX24298.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_9
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7273..7941)
DNA (669bp) protein (223aa)
ABC transporter, permease molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA1_METED rbh
modB; molybdate ABC transporter permease; K02018 molybdate transport system permease protein rbh
ABC transporter, permease molybdate transporter {ECO:0000313|EMBL:CAX24299.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_10
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7957..8787)
DNA (831bp) protein (277aa)
ABC transporter, periplasmic protein molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA2_METED rbh
molybdate ABC transporter substrate-binding protein; K02020 molybdate transport system substrate-binding protein rbh
ABC transporter, periplasmic protein molybdate transporter {ECO:0000313|EMBL:CAX24300.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_11
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9014..9967
DNA (954bp) protein (318aa)
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA3_METED rbh
regulator; molybdate and DNA-binding domains, excisionase family protein; K07219 putative molybdopterin biosynthesis protein rbh
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein {ECO:0000313|EMBL:CAX24301.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_750_bf_scaffold_1895_12
unknown

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comp(9887..10054)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1895_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10108..10437
DNA (330bp) protein (110aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1895_14
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10881..11210)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003667265
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1895_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11388..13403)
DNA (2016bp) protein (672aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
TRAG protein; K03205 type IV secretion system protein VirD4
Displaying 15 items

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