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SCNpilot_cont_750_bf_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_214_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477..1934
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J4R8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB19140.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
SCNpilot_cont_750_bf_scaffold_214_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1931..3073
DNA (1143bp) protein (381aa)
Phage integrase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2A2_9SPHN rbh
Integrase {ECO:0000313|EMBL:AKH18771.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative integrase rbh
SCNpilot_cont_750_bf_scaffold_214_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3475..6963)
DNA (3489bp) protein (1163aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGJ2_9SPHN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCA91258.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_214_4
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..8206)
DNA (1257bp) protein (419aa)
Metallophosphoesterase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGJ4_9SPHN rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:CCA91260.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_214_5
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8203..9168)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI00035C5645 rbh
Phage integrase family protein {ECO:0000313|EMBL:KFG91551.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_6
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9165..10178)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI000377D054 rbh
Uncharacterized protein {ECO:0000313|EMBL:KER38231.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10192..11487)
DNA (1296bp) protein (432aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis (Fragment) n=1 Tax=Caulobacter sp. AP07 RepID=J3AGK6_9CAUL rbh
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:EJL31541.1}; Flags: Fragment;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_750_bf_scaffold_214_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11487..11927)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HNH2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37368.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11930..12712)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N9_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI96871.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_750_bf_scaffold_214_10
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12800..16186)
DNA (3387bp) protein (1129aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
putative ATP-dependent DNA helicase (EC:3.6.1.-)
Putative ATP-dependent DNA helicase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N8_SPHJU
SCNpilot_cont_750_bf_scaffold_214_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16188..16781)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F084_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09600.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..17593)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N6_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS34998.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_750_bf_scaffold_214_13
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17899..18081
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB121
Uncharacterized protein {ECO:0000313|EMBL:GAE64467.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_14
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18227..19294
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C7I5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ79807.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_15
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19282..20145
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEF0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP66268.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_16
unknown

Not on your lists

20314..20508
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_214_17
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20500..20775)
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00037B5DB6
Transcriptional regulator {ECO:0000313|EMBL:KGB59346.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_18
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20878..21681
DNA (804bp) protein (268aa)
manB; phosphomannomutase (EC:5.4.2.8); K07024
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJF7_9SPHN
HAD family hydrolase {ECO:0000313|EMBL:KKC25606.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_cont_750_bf_scaffold_214_19
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22042..22431
DNA (390bp) protein (130aa)
UPI0003D5BB7D related cluster n=1 Tax=unknown RepID=UPI0003D5BB7D
Uncharacterized protein {ECO:0000313|EMBL:ETI58576.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_cont_750_bf_scaffold_214_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22369..23355)
DNA (987bp) protein (329aa)
cobalt transporter n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039C629A rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE52861.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
cation diffusion facilitator family transporter
SCNpilot_cont_750_bf_scaffold_214_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23496..23765)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002885993
Putative BCR, family protein {ECO:0000313|EMBL:KEZ21499.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23854..25179
DNA (1326bp) protein (442aa)
Major Facilitator Superfamily protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FY44_9BACL rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14538.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative nickel resistance protein rbh
SCNpilot_cont_750_bf_scaffold_214_23
unknown

Not on your lists

25176..25529
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_214_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25581..26840
DNA (1260bp) protein (420aa)
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N7_9SPHN rbh
CzcC protein {ECO:0000313|EMBL:GAN14536.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
metal ion efflux outer membrane factor protein family protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
SCNpilot_cont_750_bf_scaffold_214_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26837..27991
DNA (1155bp) protein (385aa)
metal transporter n=1 Tax=Sphingomonas melonis RepID=UPI000376DE79 rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
metal ion efflux membrane fusion protein family
SCNpilot_cont_750_bf_scaffold_214_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27988..31230
DNA (3243bp) protein (1081aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Exiguobacterium sp. S17 RepID=S3GHF8_9BACL rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14534.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
heavy metal efflux pump CzcA; K07239 heavy-metal exporter, HME family rbh
SCNpilot_cont_750_bf_scaffold_214_27
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31290..31625
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B756B7
hypothetical protein; K09137 hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_bf_scaffold_214_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32363..34411
DNA (2049bp) protein (683aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH49_AFIFE
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:CEG09206.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
heavy metal translocating p-type atpase
SCNpilot_cont_750_bf_scaffold_214_29
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34756..36045)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VCW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP80903.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_214_30
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36251..37099
DNA (849bp) protein (283aa)
lytic transglycosylase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C6BF
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EHJ58319.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
lytic transglycosylase, catalytic
Displaying items 1-30 of 231 in total

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