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SCNpilot_cont_750_bf_scaffold_2194

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2194_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(76..1317)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000362DBBD rbh
Integrase-like protein {ECO:0000313|EMBL:KGB52319.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
phage integrase domain/SAM domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_2194_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1490..2695
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S719_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB52318.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2194_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2950..4212)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJ94_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB52317.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCNpilot_cont_750_bf_scaffold_2194_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4209..5045)
DNA (837bp) protein (279aa)
Putative TniB-like transposition protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJ95_9SPHN rbh
Putative TniB-like transposition protein {ECO:0000313|EMBL:KGB52316.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
putative ATP-binding protein
SCNpilot_cont_750_bf_scaffold_2194_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5042..6715)
DNA (1674bp) protein (558aa)
Putative TniA-like transposition protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJ96_9SPHN rbh
Putative TniA-like transposition protein {ECO:0000313|EMBL:KGB52315.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_cont_750_bf_scaffold_2194_6
unknown

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comp(6803..7501)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2194_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7591..8610)
DNA (1020bp) protein (340aa)
ParB-like partition s domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X298_9SPHN
ParB protein {ECO:0000313|EMBL:GAN14635.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_750_bf_scaffold_2194_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8725..9924)
DNA (1200bp) protein (400aa)
Chromosome partitioning protein ParA n=1 Tax=Sphingobium baderi LL03 RepID=T0GXU7_9SPHN rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:EQB05532.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
chromosome partitioning protein ParA rbh
SCNpilot_cont_750_bf_scaffold_2194_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10100..11245)
DNA (1146bp) protein (382aa)
Initiator Replication family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X296_9SPHN rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14633.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
initiator RepB protein rbh
SCNpilot_cont_750_bf_scaffold_2194_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12163..13023
DNA (861bp) protein (287aa)
virulence-associated protein E n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C7D3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP66265.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
virulence-associated protein E rbh
SCNpilot_cont_750_bf_scaffold_2194_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13062..15296
DNA (2235bp) protein (745aa)
Putative methylase/helicase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SDV8_9SPHN
Putative methylase/helicase {ECO:0000313|EMBL:EJU11064.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
putative methylase/helicase
Displaying 11 items

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