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SCNpilot_cont_750_bf_scaffold_3946

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3946_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(216..1262)
DNA (1047bp) protein (349aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
branched-chain amino acid aminotransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B534CA rbh
SCNpilot_cont_750_bf_scaffold_3946_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1366..1866
DNA (501bp) protein (167aa)
MarR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B731FE
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12741.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
MarR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_3946_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1878..2669)
DNA (792bp) protein (264aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:AJP72419.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382B57D rbh
pyrroline-5-carboxylate reductase
SCNpilot_cont_750_bf_scaffold_3946_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2669..3181)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003790319
Uncharacterized protein {ECO:0000313|EMBL:AIT05370.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3946_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3273..3530)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50600.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_3946_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3548..4102)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037EB367
TspO/MBR family protein {ECO:0000313|EMBL:EZP52835.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
benzodiazepine receptor; K07185 tryptophan-rich sensory protein
SCNpilot_cont_750_bf_scaffold_3946_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4182..4916)
DNA (735bp) protein (245aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] rbh
hemolysin n=1 Tax=Sphingomonas elodea RepID=UPI0002631699 rbh
Hemolysin {ECO:0000313|EMBL:AJP72423.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_750_bf_scaffold_3946_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5093..5764
DNA (672bp) protein (224aa)
esterase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5D03D
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30169.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3946_9
unknown

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comp(5773..5913)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3946_10
unknown

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comp(5910..6014)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 10 items

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