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SCNpilot_cont_750_bf_scaffold_1018

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1018_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(264..1928)
DNA (1665bp) protein (555aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase catalytic region n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2M7_KRIFD rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:ADB30208.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_1018_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1929..2828)
DNA (900bp) protein (300aa)
sugar ABC transporter permease n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037F1392 rbh
Maltose/maltodextrin ABC transporter, permease protein MalG {ECO:0000313|EMBL:EWC58553.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC sugar transporter, permease component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_1018_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2825..3835)
DNA (1011bp) protein (337aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q457_KRIFD rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB30371.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_1018_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3905..5212)
DNA (1308bp) protein (436aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q456_KRIFD rbh
extracellular solute-binding protein family 1 protein; K02027 multiple sugar transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADB30370.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_1018_5
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5445..6497
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH16_NAKMY rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCH80000.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
LacI family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_1018_6
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6594..7679
DNA (1086bp) protein (362aa)
Maltose/cellubiose ABC transporter ATP-binding protein n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3CT61_9ACTO rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KES07548.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
ABC transporter ATP-binding protein; K10243 cellobiose transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1018_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7814..8854)
DNA (1041bp) protein (347aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS81_PSEUX rbh
GCN5-like N-acetyltransferase rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA22641.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1018_8
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8975..9397
DNA (423bp) protein (141aa)
organic hydroperoxide resistance protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE35B
Organic hydroperoxide resistance protein {ECO:0000313|EMBL:KFZ83977.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
organic hydroperoxide resistance protein
SCNpilot_cont_750_bf_scaffold_1018_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9413..11392)
DNA (1980bp) protein (660aa)
Acylaminoacyl-peptidase {ECO:0000313|EMBL:AEA22643.1}; EC=3.4.19.1 {ECO:0000313|EMBL:AEA22643.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acylaminoacyl-peptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIP8_PSEUX rbh
acylaminoacyl peptidase rbh
SCNpilot_cont_750_bf_scaffold_1018_10
unknown

Not on your lists

comp(11506..11625)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1018_11
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11913..12737
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036A4607
Uncharacterized protein {ECO:0000313|EMBL:KJE21828.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
thioesterase superfamily protein
SCNpilot_cont_750_bf_scaffold_1018_12
unknown

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comp(12798..12956)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1018_13
unknown

Not on your lists

comp(13081..13479)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1018_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13493..14053)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJ22_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU69164.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_750_bf_scaffold_1018_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14067..15413)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFQ6_MICPN rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAK35463.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_750_bf_scaffold_1018_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15410..16171)
DNA (762bp) protein (254aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B698EF rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK30851.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1018_17
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16168..16809)
DNA (642bp) protein (214aa)
Putative transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFQ8_MICPN
putative transporter; K02005 HlyD family secretion protein
Putative transporter {ECO:0000313|EMBL:BAK35465.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Displaying 17 items

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