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SCNpilot_cont_750_bf_scaffold_1544

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1544_1
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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2..202
DNA (201bp) protein (67aa)
Ubiquinol-cytochrome c reductase cytochrome b subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JSU6_SACES
Menaquinol-cytochrome C reductase {ECO:0000313|EMBL:KGI82081.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
qcrB; Ubiquinol-cytochrome c reductase cytochrome b subunit
SCNpilot_cont_750_bf_scaffold_1544_2
unknown

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430..732
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1544_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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857..1297
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAFF
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:AEA24132.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1544_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1294..1518
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN92_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27116.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1544_5
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1911..3161
DNA (1251bp) protein (417aa)
transcriptional regulator n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000367550F
Predicted protein {ECO:0000313|EMBL:EFL07062.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
transcriptional regulator CdaR
SCNpilot_cont_750_bf_scaffold_1544_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3396..4100)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF32B
chlorite dismutase; K09162 hypothetical protein
Chlorite dismutase {ECO:0000313|EMBL:AEA25096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1544_7
unknown

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comp(4245..4562)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1544_8
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4811..5380
DNA (570bp) protein (190aa)
formate dehydrogenase alpha subunit, selenocysteine-containing protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
dehydrogenase n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000361BC27 rbh
Dehydrogenase {ECO:0000313|EMBL:KDN19096.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
SCNpilot_cont_750_bf_scaffold_1544_9
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5489..8152
DNA (2664bp) protein (888aa)
formate dehydrogenase alpha subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase subunit alpha n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PBL2_9ACTO rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EPD64053.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
SCNpilot_cont_750_bf_scaffold_1544_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8149..9060
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MIP3_9ACTO
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEA24621.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1544_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9057..10088
DNA (1032bp) protein (344aa)
Polysulphide reductase, NrfD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR0_PSEUX
polysulfide reductase NrfD
Polysulphide reductase, NrfD {ECO:0000313|EMBL:AEA24620.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1544_12
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10156..10698
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000376E06A
Putative uncharacterized protein {ECO:0000313|EMBL:EFL29323.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1544_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10829..11002
DNA (174bp) protein (58aa)
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase, subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSM4_PSEUX
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AEA23734.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 13 items

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