ggKbase home page

SCNpilot_cont_750_bf_scaffold_1656

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1656_1
unknown

Not on your lists

3..767
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1656_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

819..1592
DNA (774bp) protein (258aa)
putative hydratase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE374
hydratase
Putative hydratase {ECO:0000313|EMBL:ABM94996.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_cont_750_bf_scaffold_1656_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1600..2430)
DNA (831bp) protein (277aa)
Glycoside hydrolase family 16 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLQ0_PSEUX
glycoside hydrolase protein
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AEA28182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1656_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2537..2992
DNA (456bp) protein (152aa)
Globin n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3T4_FRASU
globin; K06886 hemoglobin
Globin {ECO:0000313|EMBL:ADP79421.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_750_bf_scaffold_1656_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3316..4650
DNA (1335bp) protein (445aa)
Cysteine desulfurase {ECO:0000313|EMBL:AEA24882.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AEA24882.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Cysteine desulfurase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJD0_PSEUX rbh
cysteine desulfurase rbh
SCNpilot_cont_750_bf_scaffold_1656_6
unknown

Not on your lists

4812..5135
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1656_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5541..6587)
DNA (1047bp) protein (349aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] rbh
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL30_PSEUX rbh
SCNpilot_cont_750_bf_scaffold_1656_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6593..7024)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL29_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24958.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1656_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7128..7733
DNA (606bp) protein (202aa)
cytochrome-c oxidase; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] rbh
Cytochrome-c oxidase {ECO:0000313|EMBL:AEA24957.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA24957.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Cytochrome-c oxidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL28_PSEUX rbh
SCNpilot_cont_750_bf_scaffold_1656_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7773..8612
DNA (840bp) protein (280aa)
Cytochrome c class I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL27_PSEUX rbh
cytochrome c class I; K03889 ubiquinol-cytochrome c reductase cytochrome c subunit rbh
Cytochrome c class I {ECO:0000313|EMBL:AEA24956.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1656_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8609..9769
DNA (1161bp) protein (387aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL26_PSEUX rbh
Rieske (2Fe-2S) domain-containing protein; K03890 ubiquinol-cytochrome c reductase iron-sulfur subunit rbh
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA24955.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_1656_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9766..10353
DNA (588bp) protein (196aa)
Cytochrome b/b6 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL25_PSEUX
cytochrome b/b6 domain-containing protein; K03891 ubiquinol-cytochrome c reductase cytochrome b subunit
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:AEA24954.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 12 items

View Taxonomy