ggKbase home page

SCNpilot_cont_750_bf_scaffold_351

Search features with annotation key words

Displaying items 1-30 of 71 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_351_1
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(274..1893)
DNA (1620bp) protein (540aa)
LuxR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B52566 rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJS61426.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
LuxR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_351_2
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1968..2333
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B67009
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ65820.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_351_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2663..3136
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR75_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24512.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3531..4565
DNA (1035bp) protein (345aa)
Transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLC1_PSEUX rbh
LuxR family transcriptional regulator rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA25963.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4624..5301
DNA (678bp) protein (226aa)
Type 11 methyltransferase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W1G3_9ACTO rbh
type 11 methyltransferase rbh
Type 11 methyltransferase {ECO:0000313|EMBL:AGZ42989.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_750_bf_scaffold_351_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5484..7175)
DNA (1692bp) protein (564aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX15_PSEUX rbh
Fis family transcriptional regulator rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA24646.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7309..8811
DNA (1503bp) protein (501aa)
FAD dependent oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE2E rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADB73800.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_750_bf_scaffold_351_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8897..9712
DNA (816bp) protein (272aa)
alpha/beta hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE2D rbh
alpha/beta hydrolase rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:CCG03636.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_351_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9675..10895)
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ4_PSEUX rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24614.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10914..12551)
DNA (1638bp) protein (546aa)
cyclohexanone monooxygenase n=1 Tax=Amycolatopsis methanolica RepID=UPI00037B1FE5 rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:AIJ23968.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cyclohexanone monooxygenase rbh
SCNpilot_cont_750_bf_scaffold_351_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12548..13474)
DNA (927bp) protein (309aa)
esterase n=1 Tax=Amycolatopsis methanolica RepID=UPI000372846B rbh
Alpha/beta-hydrolase fold hydrolase {ECO:0000313|EMBL:AIJ23969.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
alpha/beta hydrolase rbh
SCNpilot_cont_750_bf_scaffold_351_12
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13620..15347
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037E734D rbh
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:AIJ24675.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
Fis family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_351_13
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15402..16982)
DNA (1581bp) protein (527aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI000369F584
Serine/threonine protein kinase {ECO:0000313|EMBL:KJS53749.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
SCNpilot_cont_750_bf_scaffold_351_14
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17556..18056
DNA (501bp) protein (167aa)
Tellurium resistance protein n=3 Tax=Streptomyces RepID=Q8CK50_STRCO
SCF56.25, terD; tellurium resistance protein; K05795 tellurium resistance protein TerD
Tellurium resistance protein {ECO:0000313|EMBL:CAD55270.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;"
SCNpilot_cont_750_bf_scaffold_351_15
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18090..19073
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WET8_ACTMD rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ACU39713.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_750_bf_scaffold_351_16
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19077..19682)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QLN6_ARTGO rbh
SPG23_c7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28809.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
deaminase-reductase domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_351_17
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19798..20754
DNA (957bp) protein (319aa)
Putative F420-dependent oxidoreductase, Rv1855c family n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9SVF0_COREQ rbh
fmn-dependent monooxygenase rbh
Putative F420-dependent oxidoreductase, Rv1855c family {ECO:0000313|EMBL:EGD26284.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
SCNpilot_cont_750_bf_scaffold_351_18
unknown

Not on your lists

comp(20989..21540)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_351_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21682..22425
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZW5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27791.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22429..24531)
DNA (2103bp) protein (701aa)
neprilysin; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Neprilysin {ECO:0000313|EMBL:AEA24335.1}; EC=3.4.24.11 {ECO:0000313|EMBL:AEA24335.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Neprilysin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ96_PSEUX rbh
SCNpilot_cont_750_bf_scaffold_351_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24583..25233)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPV8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26141.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_22
unknown

Not on your lists

comp(25236..25373)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_351_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25440..26054)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT52_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26270.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_351_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26333..27010
DNA (678bp) protein (226aa)
Diacylglycerol O-acyltransferase {ECO:0000256|RuleBase:RU361241}; EC=2.3.1.20 {ECO:0000256|RuleBase:RU361241};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037DEF52
acyltransferase, WS/DGAT/MGAT
SCNpilot_cont_750_bf_scaffold_351_25
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26950..27546)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037C47B8
IMPACT family member yvyE {ECO:0000313|EMBL:KJK42117.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_351_26
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27543..28775)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A16B rbh
Uncharacterized protein {ECO:0000313|EMBL:GAF45695.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_351_27
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28781..32890)
DNA (4110bp) protein (1370aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036A8276 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAF45696.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_351_28
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32887..34080)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037CF421 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFL18142.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_351_29
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34077..35612)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003773397 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAF45698.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_351_30
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35701..36408)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003772831
Uncharacterized protein {ECO:0000313|EMBL:AHI00854.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy