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SCNpilot_cont_750_bf_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_529_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77..1420)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000374B4FC rbh
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
ParB domain protein nuclease {ECO:0000313|EMBL:AEA28896.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_529_2
unknown

Not on your lists

comp(1417..1614)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1937..3682)
DNA (1746bp) protein (582aa)
Putative transposase for insertion sequence element n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BE59_RHOOB rbh
putative transposase for insertion sequence element rbh
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAH56099.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCNpilot_cont_750_bf_scaffold_529_4
unknown

Not on your lists

4263..4835
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4832..5800)
DNA (969bp) protein (323aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
DNA ligase D n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA3_PSEUX rbh
DNA ligase D {ECO:0000313|EMBL:AEA27127.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_529_6
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5924..6403)
DNA (480bp) protein (160aa)
Protein-tyrosine phosphatase, low molecular weight n=2 Tax=Gordonia RepID=F1YGL8_9ACTO
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EGD56348.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;"
putative arsenate reductase
SCNpilot_cont_750_bf_scaffold_529_7
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6400..6813)
DNA (414bp) protein (138aa)
Protein-tyrosine-phosphatase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XDN4_9PSEU
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EHR61355.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
heavy metal reductase
SCNpilot_cont_750_bf_scaffold_529_8
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6832..7494)
DNA (663bp) protein (221aa)
putative arsenate reductase (EC:1.20.4.1)
Putative arsenate reductase {ECO:0000313|EMBL:BAE46099.1}; EC=1.20.4.- {ECO:0000313|EMBL:BAE46099.1};; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
phosphotyrosine protein phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCDB
SCNpilot_cont_750_bf_scaffold_529_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7549..8643)
DNA (1095bp) protein (365aa)
Arsenical-resistance protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ2_PSEUX
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein {ECO:0000313|EMBL:AEA24612.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_529_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8640..9017)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003619828
arsR; ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEK39267.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_750_bf_scaffold_529_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9094..9564
DNA (471bp) protein (157aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVA6_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA23170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_529_12
unknown

Not on your lists

comp(9687..9977)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_13
unknown

Not on your lists

10175..10744
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10741..11025
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI0003627E04
Uncharacterized protein {ECO:0000313|EMBL:AEA28973.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11022..11651
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VIP1_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL12401.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_cont_750_bf_scaffold_529_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11648..12736
DNA (1089bp) protein (363aa)
Uncharacterized protein (Fragment) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z8_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AEA28971.1}; Flags: Fragment;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12733..14205
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z7_PSEUX rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28970.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14218..15645
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z6_PSEUX rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_529_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15642..17459
DNA (1818bp) protein (606aa)
TRAG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Z5_PSEUX
TRAG family protein {ECO:0000313|EMBL:AEA28968.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
traG; Conjugal transfer protein traG rbh
SCNpilot_cont_750_bf_scaffold_529_20
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17456..17956
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JAG5_FRASC
Uncharacterized protein {ECO:0000313|EMBL:KDA40857.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_21
Dermabacter hominis, Dermabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17953..18552
DNA (600bp) protein (200aa)
peptidase M23 (EC:3.4.-.-)
metalloendopeptidase-like membrane protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF1EF
Metalloendopeptidase {ECO:0000313|EMBL:KDS92784.1}; TaxID=1450519 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Dermabacter.;" source="Dermabacter hominis 1368.;"
SCNpilot_cont_750_bf_scaffold_529_22
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18579..19535)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TPU5_MYCSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU02064.1}; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
SCNpilot_cont_750_bf_scaffold_529_23
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19552..19995
DNA (444bp) protein (148aa)
Putative MerR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BCY0_RHOOB
Transcriptional regulator {ECO:0000313|EMBL:CDO25726.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
putative MerR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_529_24
unknown

Not on your lists

20046..20414
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_25
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20414..21808
DNA (1395bp) protein (465aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FU36_AMYMS
Putative regulatory protein {ECO:0000313|EMBL:CEL13547.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_26
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21848..22324
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037388B6
Uncharacterized protein {ECO:0000313|EMBL:CEL13546.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_529_27
unknown

Not on your lists

comp(22371..22895)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_28
unknown

Not on your lists

comp(23011..23418)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_529_29
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23444..24295)
DNA (852bp) protein (284aa)
Bifunctional DNA primase/polymerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L750_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGI80633.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
Bifunctional DNA primase/polymerase
SCNpilot_cont_750_bf_scaffold_529_30
unknown

Not on your lists

24628..25161
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000364AA05
Displaying items 1-30 of 54 in total

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