ggKbase home page

SCNpilot_cont_750_bf_scaffold_604

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_604_1
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..174
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000361C98E
Band 7 domain-containing protein {ECO:0000313|EMBL:KIF71525.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
band 7 domain-containing protein
SCNpilot_cont_750_bf_scaffold_604_2
unknown

Not on your lists

comp(117..335)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_604_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(537..908)
DNA (372bp) protein (124aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW74_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_4
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1467..1778
DNA (312bp) protein (104aa)
Transcriptional regulator WhiB n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JPA6_STREN
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_604_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1775..2428
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0G215_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK44171.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_750_bf_scaffold_604_6
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2425..4110
DNA (1686bp) protein (562aa)
adhA1; alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Putative alcohol dehydrogenase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82NZ9_STRAW
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAC68851.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
SCNpilot_cont_750_bf_scaffold_604_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4107..6764
DNA (2658bp) protein (886aa)
Mg(2+) transport ATPase, P-type; K01531 Mg2+-importing ATPase [EC:3.6.3.2] rbh
Mg(2+) transport ATPase, P-type n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5B1_STRRD rbh
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:ACZ87635.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_750_bf_scaffold_604_8
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6784..8235)
DNA (1452bp) protein (484aa)
Gluconate permease n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E5U3_9MICO rbh
Gluconate permease {ECO:0000313|EMBL:CCH71505.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
gnuT; gluconate permease GnuT rbh
SCNpilot_cont_750_bf_scaffold_604_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8232..8762)
DNA (531bp) protein (177aa)
thermoresistant glucokinase family carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12]
Carbohydrate kinase, thermoresistant glucokinase family {ECO:0000313|EMBL:ADP83563.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ADP83563.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JDD0_FRASU
SCNpilot_cont_750_bf_scaffold_604_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9003..9695
DNA (693bp) protein (231aa)
ornithine aminotransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B661C6
Uncharacterized protein {ECO:0000313|EMBL:EWM12133.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative osmotically inducible protein Y
SCNpilot_cont_750_bf_scaffold_604_11
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10007..10144
DNA (138bp) protein (46aa)
NAD(P) transhydrogenase subunit beta; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; Flags: Precursor;; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003741056
SCNpilot_cont_750_bf_scaffold_604_12
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10186..10605
DNA (420bp) protein (140aa)
Universal stress protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GPT4_9ACTO
Universal stress protein {ECO:0000313|EMBL:EGX54482.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
stress-inducible protein
SCNpilot_cont_750_bf_scaffold_604_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11004..12287)
DNA (1284bp) protein (428aa)
Transcriptional regulator, CdaR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T7_PSEUX rbh
transcriptional regulator CdaR rbh
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AEA27997.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_14
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12436..13383)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000380D90E
Universal stress protein UspA {ECO:0000313|EMBL:AKH82118.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_604_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13380..14345)
DNA (966bp) protein (322aa)
Stomatin family protein n=2 Tax=Rhodococcus opacus RepID=C1AS68_RHOOB rbh
stomatin family protein rbh
Stomatin family protein {ECO:0000313|EMBL:EKT78902.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
SCNpilot_cont_750_bf_scaffold_604_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14431..14709)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27994.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_17
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14823..15287
DNA (465bp) protein (155aa)
Transcriptional regulator, MarR family n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRW3_BLASD
marR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCG02957.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_604_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15173..15985)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1T6_PSEUX
hypothetical protein; K06204 DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27996.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_19
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16161..16619)
DNA (459bp) protein (153aa)
Transcription elongation factor GreA n=1 Tax=Saccharomonospora glauca K62 RepID=I1D635_9PSEU
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
transcription elongation factor GreA; K03624 transcription elongation factor GreA
SCNpilot_cont_750_bf_scaffold_604_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18013..19287)
DNA (1275bp) protein (425aa)
NADH-quinone oxidoreductase subunit F; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:AEA27693.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AEA27693.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
NADH-quinone oxidoreductase, F subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYW8_PSEUX
SCNpilot_cont_750_bf_scaffold_604_21
unknown

Not on your lists

comp(19367..19537)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_604_22
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19534..19890)
DNA (357bp) protein (119aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBL7_GEOOG
LuxR family transcriptional regulator {ECO:0000313|EMBL:EWT02914.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Cupin 2 barrel domain-containing protein
SCNpilot_cont_750_bf_scaffold_604_23
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20224..20547)
DNA (324bp) protein (108aa)
RNA polymerase-binding protein RbpA n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q9H6_STANL
hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCNpilot_cont_750_bf_scaffold_604_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20668..21507)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003664464
Uncharacterized protein {ECO:0000313|EMBL:AHH98816.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_604_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21745..22212
DNA (468bp) protein (156aa)
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVW3_PSEUX
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEA25448.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_26
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22383..23051)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000376B00E
Putative transcriptional regulator {ECO:0000313|EMBL:AIJ26161.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_604_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23044..23406)
DNA (363bp) protein (121aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUK5_PSEUX
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:AEA25395.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23530..24273
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUK4_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25394.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_604_29
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24281..24670
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3B582_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD89342.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
SC6D11.22c; hypothetical protein
SCNpilot_cont_750_bf_scaffold_604_30
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24925..26382)
DNA (1458bp) protein (486aa)
catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6] rbh
Catalase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5X9E6_MYCNE rbh
Catalase KatE {ECO:0000313|EMBL:CDQ46397.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
Displaying items 1-30 of 38 in total

View Taxonomy