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SCNpilot_cont_750_bf_scaffold_520

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_520_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..467
DNA (465bp) protein (155aa)
UPI0003CF0A97 related cluster n=1 Tax=unknown RepID=UPI0003CF0A97
Sugar ABC transporter, permease protein, rbsC-2 {ECO:0000313|EMBL:CDX25630.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_520_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(753..1424)
DNA (672bp) protein (224aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK07_MESCW
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX25628.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_520_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1658..4669
DNA (3012bp) protein (1004aa)
AsmA family protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6C1A3_SINMB rbh
AsmA family protein {ECO:0000313|EMBL:CDX46550.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
AsmA family protein; K07289 AsmA protein rbh
SCNpilot_cont_750_bf_scaffold_520_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4806..4976
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX46583.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_520_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5191..6120
DNA (930bp) protein (310aa)
hypothetical protein; K04091 alkanesulfonate monooxygenase [EC:1.14.14.5] rbh
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIQ7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV04559.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_cont_750_bf_scaffold_520_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..7569)
DNA (1392bp) protein (464aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RNA-splicing ligase RtcB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6Y7_9RHIZ rbh
hypothetical protein
SCNpilot_cont_750_bf_scaffold_520_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8722..10281)
DNA (1560bp) protein (520aa)
Ribonucleoprotein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6Y8_9RHIZ rbh
Ribonucleoprotein {ECO:0000313|EMBL:EHH12548.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ribonucleoprotein; K11089 60 kDa SS-A/Ro ribonucleoprotein
SCNpilot_cont_750_bf_scaffold_520_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10488..12089
DNA (1602bp) protein (534aa)
Sigma-54 interacting transcription regulator protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6Y9_9RHIZ rbh
Sigma-54 interacting transcription regulator protein {ECO:0000313|EMBL:EHH12549.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sigma-54 interacting transcription regulator protein; K14414 transcriptional regulatory protein RtcR
SCNpilot_cont_750_bf_scaffold_520_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12163..12468)
DNA (306bp) protein (102aa)
UPI0003D01076 related cluster n=1 Tax=unknown RepID=UPI0003D01076
Uncharacterized protein {ECO:0000313|EMBL:ESZ25497.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_520_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12465..12737)
DNA (273bp) protein (91aa)
LuxR family transcriptional regulator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKW7_MESCW
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:ADV10277.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_750_bf_scaffold_520_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12748..12996)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKW8_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10278.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_750_bf_scaffold_520_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13069..13728)
DNA (660bp) protein (220aa)
Nitroreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKU3_9RHIZ rbh
Nitroreductase {ECO:0000313|EMBL:CCV04947.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_520_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13807..14127)
DNA (321bp) protein (107aa)
UPI0003CFA2FF related cluster n=1 Tax=unknown RepID=UPI0003CFA2FF
Dehydrogenase {ECO:0000313|EMBL:ESZ25499.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SagB-type dehydrogenase domain-containing protein
SCNpilot_cont_750_bf_scaffold_520_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14191..14286)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F166_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11102.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_750_bf_scaffold_520_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..15428)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F460_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11101.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_520_16
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16110..16754)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Salmonella enterica I RepID=V1SXT1_SALET
HNH endonuclease family protein {ECO:0000313|EMBL:AIO40272.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
HNH endonuclease family protein
SCNpilot_cont_750_bf_scaffold_520_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16751..18061)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI000371499F rbh
Uncharacterized protein {ECO:0000313|EMBL:KJB92018.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ATP-dependent endonuclease of the OLD family-like protein
SCNpilot_cont_750_bf_scaffold_520_18
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18958..19248
DNA (291bp) protein (97aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003638970
Membrane protein {ECO:0000313|EMBL:EZQ14317.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K02221 YggT family protein
SCNpilot_cont_750_bf_scaffold_520_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19253..19570
DNA (318bp) protein (106aa)
UPI0003CF96B9 related cluster n=1 Tax=unknown RepID=UPI0003CF96B9
UPF0235 protein MPL3365_150073 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_520_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19646..20527)
DNA (882bp) protein (294aa)
Transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EP3_RHILO rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDX52351.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_520_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20538..21605)
DNA (1068bp) protein (356aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003723E61 rbh
Fused maltose transport subunit, ATP-binding component of ABC superfamily regulatory protein {ECO:0000313|EMBL:CDX46538.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_520_22
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21608..22378)
DNA (771bp) protein (257aa)
UPI0003CF5299 related cluster n=1 Tax=unknown RepID=UPI0003CF5299 rbh
Catenin {ECO:0000313|EMBL:ESY94185.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
SCNpilot_cont_750_bf_scaffold_520_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22559..23785
DNA (1227bp) protein (409aa)
Sugar ABC transporter, sugar-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EP6_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX42257.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
sugar ABC transporter (sugar-binding protein); K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_520_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24081..24950
DNA (870bp) protein (290aa)
Sugar ABC transporter, permease protein ThuF n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EP7_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX52358.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_520_25
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..25771
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKX9_MESCW rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADV10289.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_750_bf_scaffold_520_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26020..27504
DNA (1485bp) protein (495aa)
Microcystin LR degradation protein MlrC n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YE91_MESOW rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Microcystin LR degradation protein MlrC rbh
SCNpilot_cont_750_bf_scaffold_520_27
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27639..28556
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003705500 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KFX29147.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
putative transcriptional regulator, LysR family
SCNpilot_cont_750_bf_scaffold_520_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28727..29542
DNA (816bp) protein (272aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003710329 rbh
Putative 5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ADZ70386.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_bf_scaffold_520_29
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29653..30660
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000379AD55 rbh
Periplasmic substrate-binding component of an ABC superfamily nucleoside transporter {ECO:0000313|EMBL:KFC78825.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
sugar ABC transporter periplasmic sugar-binding protein; K07335 basic membrane protein A and related proteins rbh
SCNpilot_cont_750_bf_scaffold_520_30
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30971..32521
DNA (1551bp) protein (517aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000378FCB1 rbh
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:EJL87247.1}; Flags: Precursor;; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
Displaying items 1-30 of 54 in total

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