ggKbase home page

SCNpilot_cont_750_bf_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_299_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..164)
DNA (162bp) protein (54aa)
aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C1778
Fatty-acid desaturase {ECO:0000313|EMBL:EIL89769.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
fatty-acid desaturase
SCNpilot_cont_750_bf_scaffold_299_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315..1076
DNA (762bp) protein (254aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NI92_9GAMM rbh
ABC-type multidrug transport system, ATPase component rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG90614.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_299_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1073..1828
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD0_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL89771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1828..3183
DNA (1356bp) protein (452aa)
ABC transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN1_9GAMM rbh
ABC transporter {ECO:0000313|EMBL:EIL97222.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type uncharacterized transporter rbh
SCNpilot_cont_750_bf_scaffold_299_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3180..3674
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8R9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95860.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3674..4501
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8R8_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_299_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4663..5262
DNA (600bp) protein (200aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR02_9GAMM
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL89643.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nitroreductase family protein
SCNpilot_cont_750_bf_scaffold_299_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5337..6113)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI97_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90619.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_299_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6184..6855)
DNA (672bp) protein (224aa)
thymidine kinase (EC:2.7.1.21) rbh
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thymidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM2_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_299_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6885..8867
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA/RNA helicase, superfamily I (EC:3.6.1.-) rbh
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM4_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_299_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8941..10530
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F20F4A
Uncharacterized protein {ECO:0000313|EMBL:KGI77484.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative sulfotransferase
SCNpilot_cont_750_bf_scaffold_299_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10624..12204
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F20F4A
Sulfotransferase {ECO:0000313|EMBL:KGM51977.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
putative sulfotransferase
SCNpilot_cont_750_bf_scaffold_299_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12269..13768
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F20F4A
putative sulfotransferase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_750_bf_scaffold_299_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13859..16786)
DNA (2928bp) protein (976aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D513C0 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AIF46167.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TonB-dependent outer membrane receptor protein rbh
SCNpilot_cont_750_bf_scaffold_299_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17070..18104)
DNA (1035bp) protein (345aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR07_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIL89648.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease rbh
SCNpilot_cont_750_bf_scaffold_299_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18304..19203
DNA (900bp) protein (300aa)
Putative acid phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM2_9GAMM rbh
Putative acid phosphatase {ECO:0000313|EMBL:EIL97213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative secreted acid phosphatase rbh
SCNpilot_cont_750_bf_scaffold_299_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19541..20470
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ55_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_299_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20571..23276
DNA (2706bp) protein (902aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
glycerol-3-phosphate acyltransferase (EC:2.3.1.15) rbh
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR10_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_299_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23315..24064
DNA (750bp) protein (250aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ57_9GAMM rbh
ubiquinone/menaquinone biosynthesis methyltransferase rbh
SCNpilot_cont_750_bf_scaffold_299_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24075..24713
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR12_9GAMM
Membrane protein {ECO:0000313|EMBL:AHX15053.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24793..25059
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR15_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89656.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25059..25673
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25702..26391)
DNA (690bp) protein (230aa)
gst8; glutathione S-transferase (EC:2.5.1.18); K04097 glutathione S-transferase [EC:2.5.1.18] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A20BD rbh
Glutathione S-transferase {ECO:0000313|EMBL:AIF46176.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_299_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26421..27344)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHJ0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98931.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative permease, DMT superfamily rbh
SCNpilot_cont_750_bf_scaffold_299_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27466..27960
DNA (495bp) protein (165aa)
AsnC family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000347663F
transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AIF46179.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_299_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28102..29799
DNA (1698bp) protein (566aa)
acid phosphatase (EC:3.1.3.2)
Acid phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR20_9GAMM
Acid phosphatase {ECO:0000313|EMBL:EIL89661.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_bf_scaffold_299_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29805..30758
DNA (954bp) protein (318aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Proline iminopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI94_9GAMM rbh
proline iminopeptidase
SCNpilot_cont_750_bf_scaffold_299_28
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30749..31414)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CRZ4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGM52577.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_299_29
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31416..32057)
DNA (642bp) protein (214aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SLR6_STRM5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM52576.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_299_30
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32054..34216)
DNA (2163bp) protein (721aa)
Laminin-like protein lam-2 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SY91_XANCT rbh
Laminin-like protein lam-2 {ECO:0000313|EMBL:CCP40309.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
putative transmembrane protein rbh
Displaying items 1-30 of 146 in total

View Taxonomy