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SCNpilot_cont_750_bf_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 74 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_576_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1436
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2W1E0_9BURK
YadA domain-containing protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAY65786.1}; TaxID=350702 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia PC184.;"
SCNpilot_cont_750_bf_scaffold_576_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1599..3995
DNA (2397bp) protein (799aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Burkholderia sp. SJ98 RepID=K8R5K2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHX16147.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_576_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4193..5020)
DNA (828bp) protein (276aa)
Lysophospholipase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ7_9GAMM
lysophospholipase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_576_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5026..7029)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXN9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91980.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
trypsin-like serine protease with C-terminal PDZ domain
SCNpilot_cont_750_bf_scaffold_576_5
unknown

Not on your lists

comp(6978..7214)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_576_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7236..12005
DNA (4770bp) protein (1590aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
DEAD/DEAH box helicase (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXN8_9GAMM rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:EIL91979.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_bf_scaffold_576_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11995..13059)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C3086 rbh
Membrane protein {ECO:0000313|EMBL:KGI77572.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_576_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13157..15478)
DNA (2322bp) protein (774aa)
Beta-N-acetylhexosaminidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET2_9GAMM rbh
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:EIL97973.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetyl-beta-hexosaminidase rbh
SCNpilot_cont_750_bf_scaffold_576_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15672..18374)
DNA (2703bp) protein (901aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY69_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL92160.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor rbh
SCNpilot_cont_750_bf_scaffold_576_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18451..19548)
DNA (1098bp) protein (366aa)
glucokinase (EC:2.7.1.2) rbh
Glucokinase {ECO:0000313|EMBL:AGG87346.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AGG87346.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucokinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY7_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_576_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19930..21216
DNA (1287bp) protein (429aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY67_9GAMM rbh
Glucose/galactose transporter {ECO:0000313|EMBL:EIL92158.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glucose/galactose transporter rbh
SCNpilot_cont_750_bf_scaffold_576_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21340..22389
DNA (1050bp) protein (350aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY66_9GAMM rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL92157.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_576_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22499..22870)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030FF689
Uncharacterized protein {ECO:0000313|EMBL:AIF46130.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_576_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23003..23860)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97979.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
EamA-like transporter family rbh
SCNpilot_cont_750_bf_scaffold_576_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24016..24840
DNA (825bp) protein (275aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEP7_9GAMM rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:EIL97938.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protease subunit, stomatin/prohibitin
SCNpilot_cont_750_bf_scaffold_576_16
unknown

Not on your lists

25034..25747
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_576_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25851..26441
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96174.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K09965 hypothetical protein
SCNpilot_cont_750_bf_scaffold_576_18
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26442..27092)
DNA (651bp) protein (217aa)
Entner-Doudoroff aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUV3_9GAMM
Entner-Doudoroff aldolase {ECO:0000313|EMBL:AFC84563.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_750_bf_scaffold_576_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27172..29016)
DNA (1845bp) protein (615aa)
6-phosphogluconate dehydratase; K01690 phosphogluconate dehydratase [EC:4.2.1.12] rbh
Phosphogluconate dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUW2_9GAMM rbh
Phosphogluconate dehydratase {ECO:0000313|EMBL:KGI77568.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_cont_750_bf_scaffold_576_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29375..30079)
DNA (705bp) protein (235aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ4_9GAMM
6-phosphogluconolactonase {ECO:0000313|EMBL:EIL97945.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
6-phosphogluconolactonase
SCNpilot_cont_750_bf_scaffold_576_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30086..31552)
DNA (1467bp) protein (489aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP84_9GAMM rbh
glucose-6-phosphate 1-dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_576_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31711..32514
DNA (804bp) protein (268aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E3_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL93634.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_576_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32581..33612
DNA (1032bp) protein (344aa)
Glucosamine-fructose-6-phosphate aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUV8_9GAMM rbh
putative phosphosugar isomerase rbh
Putative phosphosugar isomerase {ECO:0000313|EMBL:AGG87314.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_576_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33734..34873
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ8_9GAMM rbh
N-acetylglucosamine-6-phosphate deacetylase rbh
SCNpilot_cont_750_bf_scaffold_576_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35277..37178
DNA (1902bp) protein (634aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP77_9GAMM rbh
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL89018.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent vitamin B12 receptor rbh
SCNpilot_cont_750_bf_scaffold_576_26
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37982..38635)
DNA (654bp) protein (218aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE16023.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_cont_750_bf_scaffold_576_27
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38639..39661)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K304_9BACT
Uncharacterised protein {ECO:0000313|EMBL:CRE08243.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_576_28
unknown

Not on your lists

comp(39731..40441)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_576_29
unknown

Not on your lists

comp(40643..40975)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_576_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41431..44610
DNA (3180bp) protein (1060aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=M4NC24_9GAMM rbh
cation/multidrug efflux pump rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGG87322.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 74 in total

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