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SCNpilot_cont_750_bf_scaffold_594

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_594_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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221..2704
DNA (2484bp) protein (828aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ14_9GAMM rbh
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component rbh
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:AGG88041.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_594_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2750..3379
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346913A
Glutathione S-transferase {ECO:0000313|EMBL:EIL90020.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutathione S-transferase
SCNpilot_cont_750_bf_scaffold_594_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3408..4559
DNA (1152bp) protein (384aa)
Na+/H+ antiporter NhaD-like permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W921_9GAMM rbh
Na+/H+ antiporter NhaD-like permease {ECO:0000313|EMBL:EIL95962.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Na+/H+ antiporter NhaD-like permease rbh
SCNpilot_cont_750_bf_scaffold_594_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4596..5369)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJS2_9GAMM
Protein of unknown function (DUF2807)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_594_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6284)
DNA (807bp) protein (269aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EIL96276.1}; EC=3.6.1.19 {ECO:0000313|EMBL:EIL96276.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y5_9GAMM rbh
MazG family protein
SCNpilot_cont_750_bf_scaffold_594_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6281..7102)
DNA (822bp) protein (274aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y4_9GAMM rbh
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EIL96275.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_594_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7099..7656)
DNA (558bp) protein (186aa)
Adenosine nucleotide hydrolase NudE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZI1_9GAMM
Adenosine nucleotide hydrolase NudE {ECO:0000313|EMBL:EIL92622.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ADP-ribose pyrophosphatase
SCNpilot_cont_750_bf_scaffold_594_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7721..8500)
DNA (780bp) protein (260aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y2_9GAMM rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIL96273.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
SCNpilot_cont_750_bf_scaffold_594_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8497..9252)
DNA (756bp) protein (252aa)
Type II secretion system protein N (GspN) n=1 Tax=Rhodanobacter denitrificans RepID=M4NES4_9GAMM
type II secretion system protein N (GspN)
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:AGG88033.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_594_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..10720
DNA (1365bp) protein (455aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS5_9GAMM
adenosylmethionine-8-amino-7-oxononanoate transaminase
SCNpilot_cont_750_bf_scaffold_594_11
unknown

Not on your lists

comp(10748..11062)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_594_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11202..11936
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ25_9GAMM rbh
RNA methyltransferase, RsmE family rbh
SCNpilot_cont_750_bf_scaffold_594_13
unknown

Not on your lists

comp(11948..12112)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_594_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12112..12609)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9X8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96269.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
chemotaxis signal transduction protein
SCNpilot_cont_750_bf_scaffold_594_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12606..14144)
DNA (1539bp) protein (513aa)
Protein-glutamate methylesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJT3_9GAMM
Protein-glutamate methylesterase {ECO:0000313|EMBL:EIL99724.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain rbh
SCNpilot_cont_750_bf_scaffold_594_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14137..20220)
DNA (6084bp) protein (2028aa)
CheA signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV63_9GAMM rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EIL91104.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chemotaxis protein histidine kinase-like protein
SCNpilot_cont_750_bf_scaffold_594_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20302..22332)
DNA (2031bp) protein (677aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ29_9GAMM rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG88026.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_594_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22459..23004)
DNA (546bp) protein (182aa)
Chemotaxis signal transduction protein pili n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV65_9GAMM
Chemotaxis signal transduction protein pili {ECO:0000313|EMBL:EIL91106.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chemotaxis signal transduction protein
SCNpilot_cont_750_bf_scaffold_594_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23001..23372)
DNA (372bp) protein (124aa)
Two-component system response regulatory protein (PilH) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV66_9GAMM
Two-component system response regulatory protein (PilH) {ECO:0000313|EMBL:EIL91107.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_cont_750_bf_scaffold_594_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23396..23806)
DNA (411bp) protein (137aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ32_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88023.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_594_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24149..25111
DNA (963bp) protein (321aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione synthetase (EC:6.3.2.3) rbh
Glutathione synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJT9_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_594_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25108..25968
DNA (861bp) protein (287aa)
TonB family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W805_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIL95596.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB family protein rbh
SCNpilot_cont_750_bf_scaffold_594_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26039..26608
DNA (570bp) protein (190aa)
UPF0301 protein UU7_14745 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV70_9GAMM rbh
UPF0301 protein UU7_14745 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_594_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26605..27054
DNA (450bp) protein (150aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Putative Holliday junction resolvase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W802_9GAMM
RNAse H-fold protein YqgF
SCNpilot_cont_750_bf_scaffold_594_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27051..27977
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aspartate carbamoyltransferase (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W801_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_594_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28097..29896
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99735.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_594_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29975..31141)
DNA (1167bp) protein (389aa)
twitching motility protein PilT n=1 Tax=Dyella ginsengisoli RepID=UPI0003482795 rbh
pilus retraction protein PilT rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_594_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31288..31833)
DNA (546bp) protein (182aa)
twitching motility protein PilT n=1 Tax=Dyella ginsengisoli RepID=UPI000345FF9C
Twitching motility protein PilT {ECO:0000313|EMBL:AHX12217.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
pilus retraction ATPase PilT
SCNpilot_cont_750_bf_scaffold_594_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32569..33396
DNA (828bp) protein (276aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBI4_9GAMM rbh
pyrroline-5-carboxylate reductase rbh
SCNpilot_cont_750_bf_scaffold_594_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33393..33968
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZK4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92645.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
YGGT family protein
Displaying items 1-30 of 192 in total

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