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SCNpilot_cont_750_bf_scaffold_678

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_678_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_678_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

516..3530
DNA (3015bp) protein (1005aa)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NLS0_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_678_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3527..5293)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003199C8C rbh
Cyclic beta-1,2-glucan ABC transporter {ECO:0000313|EMBL:AIF49309.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cyclic beta-1,2-glucan ABc transporter; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_750_bf_scaffold_678_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5347..6030)
DNA (684bp) protein (228aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY2_9GAMM rbh
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EIL89623.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
haloacid dehalogenase superfamily enzyme, subfamily IA rbh
SCNpilot_cont_750_bf_scaffold_678_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6092..7105)
DNA (1014bp) protein (338aa)
Glucokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC9_9GAMM rbh
Glucokinase {ECO:0000313|EMBL:AHX15022.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
glucokinase rbh
SCNpilot_cont_750_bf_scaffold_678_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7204..8853)
DNA (1650bp) protein (550aa)
Peptidase S53 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC8_9GAMM rbh
Peptidase S53 {ECO:0000313|EMBL:EIM03770.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptidase S53 propeptide; K08677 kumamolisin
SCNpilot_cont_750_bf_scaffold_678_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9024..10016
DNA (993bp) protein (331aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB3_9GAMM rbh
delta-aminolevulinic acid dehydratase rbh
SCNpilot_cont_750_bf_scaffold_678_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10152..11087
DNA (936bp) protein (312aa)
Esterase/lipase n=1 Tax=Rhodanobacter denitrificans RepID=M4NET8_9GAMM
Xylanase {ECO:0000313|EMBL:AHX14916.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
esterase/lipase
SCNpilot_cont_750_bf_scaffold_678_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11106..11486)
DNA (381bp) protein (127aa)
4-oxalocrotonate tautomerase n=1 Tax=Dyella ginsengisoli RepID=UPI000349478A
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AHX14898.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
4-oxalocrotonate tautomerase
SCNpilot_cont_750_bf_scaffold_678_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11608..12438)
DNA (831bp) protein (277aa)
Glutamine cyclotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC2_9GAMM rbh
Glutamine cyclotransferase {ECO:0000313|EMBL:EIM03764.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glutamine cyclotransferase rbh
SCNpilot_cont_750_bf_scaffold_678_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12499..14337
DNA (1839bp) protein (613aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC1_9GAMM rbh
Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein {ECO:0000313|EMBL:EIM03763.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Kef-type potassium/proton antiporter, CPA2 family
SCNpilot_cont_750_bf_scaffold_678_12
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14434..15513
DNA (1080bp) protein (360aa)
ADP-heptose--LPS heptosyltransferase; K02843 heptosyltransferase II [EC:2.4.-.-] rbh
ADP-heptose:LPS heptosyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZN1_FRAAD rbh
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AFC87091.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_cont_750_bf_scaffold_678_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15545..19033)
DNA (3489bp) protein (1163aa)
Ankyrin repeat-containing protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NAE4_9GAMM rbh
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGG87445.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ankyrin repeat-containing protein rbh
SCNpilot_cont_750_bf_scaffold_678_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19123..19419)
DNA (297bp) protein (99aa)
YcgL domain-containing protein UUC_16390 n=1 Tax=Rhodanobacter denitrificans RepID=I4WHS8_9GAMM
hypothetical protein
YcgL domain-containing protein R2APBS1_0270 {ECO:0000256|HAMAP-Rule:MF_01866}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_678_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19616..21118
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHS7_9GAMM
long-chain fatty acid transport protein
Long-chain fatty acid transport protein {ECO:0000313|EMBL:AGG87447.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_678_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21203..22618)
DNA (1416bp) protein (472aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD3_9GAMM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_678_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22757..25945)
DNA (3189bp) protein (1063aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8) rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AGG87449.1}; EC=1.5.1.12 {ECO:0000313|EMBL:AGG87449.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AGG87449.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAF6_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_678_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26138..26626
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003603023
Membrane protein {ECO:0000313|EMBL:AHX14882.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
integral membrane protein
SCNpilot_cont_750_bf_scaffold_678_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26647..27630
DNA (984bp) protein (328aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ88_9GAMM
cytochrome c oxidase, subunit II
SCNpilot_cont_750_bf_scaffold_678_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27745..29172
DNA (1428bp) protein (476aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY2_9GAMM rbh
cytochrome c oxidase, subunit I rbh
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIL98870.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 20 items

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