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SCNpilot_cont_750_bf_scaffold_793

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_793_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..630
DNA (630bp) protein (210aa)
Nitric-oxide reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY9_9GAMM
nitric oxide reductase large subunit
Nitric-oxide reductase {ECO:0000313|EMBL:EIM02931.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_793_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

724..1128
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02930.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_793_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1125..3068
DNA (1944bp) protein (648aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY7_9GAMM rbh
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EIM02929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PLP-dependent enzyme, glutamate decarboxylase rbh
SCNpilot_cont_750_bf_scaffold_793_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3084..4193
DNA (1110bp) protein (370aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P6_9GAMM rbh
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EIL93037.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cysteine synthase rbh
SCNpilot_cont_750_bf_scaffold_793_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4258..5778
DNA (1521bp) protein (507aa)
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
UbiD family decarboxylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT23_9GAMM rbh
UbiD family decarboxylase {ECO:0000313|EMBL:EIL90364.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_bf_scaffold_793_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6536
DNA (759bp) protein (253aa)
Prephenate dehydrogenase/chorismate mutase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUT9_9GAMM rbh
Prephenate dehydrogenase/chorismate mutase {ECO:0000313|EMBL:EIL90980.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
prephenate dehydrogenase
SCNpilot_cont_750_bf_scaffold_793_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6554..6886)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYL6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89962.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_793_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6939..7412)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034590CA
DnrO protein {ECO:0000313|EMBL:AHX15920.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_793_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7567..8565
DNA (999bp) protein (333aa)
Putative protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P1_9GAMM rbh
Putative protease {ECO:0000313|EMBL:EIL93032.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protease rbh
SCNpilot_cont_750_bf_scaffold_793_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..9457
DNA (879bp) protein (293aa)
Putative protease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI17_9GAMM rbh
Putative protease {ECO:0000313|EMBL:EIL86858.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
protease
SCNpilot_cont_750_bf_scaffold_793_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9492..10169)
DNA (678bp) protein (226aa)
Activase of anaerobic class III ribonucleotide reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI13_9GAMM rbh
Activase of anaerobic class III ribonucleotide reductase {ECO:0000313|EMBL:EIL86854.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nrdG; activase of anaerobic class III ribonucleotide reductase
SCNpilot_cont_750_bf_scaffold_793_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10166..10351)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI12_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL86853.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_793_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..12155)
DNA (1758bp) protein (586aa)
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:EIL86852.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EIL86852.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] rbh
Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI11_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_793_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12378..13604)
DNA (1227bp) protein (409aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.41) rbh
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGG89989.1}; EC=2.3.1.41 {ECO:0000313|EMBL:AGG89989.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Beta-ketoacyl-[ACP] synthase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI9_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_793_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13606..14121)
DNA (516bp) protein (172aa)
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA (EC:4.2.1.59) rbh
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobact
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL3_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_793_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14247..15692)
DNA (1446bp) protein (482aa)
L-aspartate oxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI7_9GAMM
L-aspartate oxidase {ECO:0000313|EMBL:EIL96503.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate oxidase
SCNpilot_cont_750_bf_scaffold_793_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15689..16543)
DNA (855bp) protein (285aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
quinolinate synthetase (EC:2.5.1.72) rbh
Quinolinate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT38_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_793_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16682..17521)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93025.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_793_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17511..17900)
DNA (390bp) protein (130aa)
DGC domain containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL0_9GAMM
DGC domain containing protein {ECO:0000313|EMBL:EIL96501.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_793_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17911..19155)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BCD77 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89994.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_793_21
unknown

Not on your lists

comp(19136..19330)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036B0E50
SCNpilot_cont_750_bf_scaffold_793_22

Not on your lists

comp(19456..20775)
DNA (1320bp) protein (440aa)
Outer membrane porin (Fragment) n=2 Tax=mine drainage metagenome RepID=T1AS82_9ZZZZ rbh
Outer membrane porin {ECO:0000313|EMBL:EQD63431.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_793_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20887..21453)
DNA (567bp) protein (189aa)
SCO1/SenC family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC3_9GAMM
SCO1/SenC family protein {ECO:0000313|EMBL:EIL98514.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
SCNpilot_cont_750_bf_scaffold_793_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21590..22348)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_793_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22350..23798)
DNA (1449bp) protein (483aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28551.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28551.1};; Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:AGG89997.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Copper-containing nitrite reductase n=2 Tax=Rhodanobacter RepID=D5JAK6_9GAMM rbh
dissimilatory nitrite reductase (NO-forming), copper type apoprotein rbh
SCNpilot_cont_750_bf_scaffold_793_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24007..24558)
DNA (552bp) protein (184aa)
Cytochrome B561 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIN0_9GAMM
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:AGG89952.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_793_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24641..25432)
DNA (792bp) protein (264aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI0_9GAMM
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AGG89998.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_793_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25429..26826)
DNA (1398bp) protein (466aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Coproporphyrinogen-III oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU2_9GAMM rbh
oxygen-independent coproporphyrinogen III oxidase rbh
SCNpilot_cont_750_bf_scaffold_793_29
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27081..29381
DNA (2301bp) protein (767aa)
nitric oxide reductase; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Nitric oxide reductase n=1 Tax=Burkholderia sp. H160 RepID=B5WCL6_9BURK rbh
Nitric oxide reductase {ECO:0000313|EMBL:EEA03904.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
SCNpilot_cont_750_bf_scaffold_793_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29502..30845)
DNA (1344bp) protein (448aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W584_9GAMM rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL94625.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
major facilitator superfamily protein rbh
Displaying items 1-30 of 50 in total

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