ggKbase home page

SCNpilot_cont_750_bf_scaffold_519_247

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(260186..262639)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel MscS n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 802.0
  • Bit_score: 1069
  • Evalue 0.0
  • rbh
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EIL86908.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 802.0
  • Bit_score: 1069
  • Evalue 0.0
small-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 810.0
  • Bit_score: 915
  • Evalue 1.00e-263
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2454
ATGCGCACCCCGTTCTGTCGCCTGCCGGCGCTTCCGGCCTTCCTGCTGGCCCTGGTACTCGCGCTCGGCGCCTCCCCTGCGCGGGCCCAGGCCGAACCCGATACTCCCGCCCCCGCCGCCACGCCGGCGCAGATCCTGCAGCAGTCCAGCGACCAGCTCGACGCGGTGAAGAAGGCGCTGGCGGATGCGCAGAAGAACAAGGCGGCCTCCCCCTCCCCGCCGCTGGCCGACCTGCGCACCAGCACGCTGCAGGTGCAGGACCAGGCGCGCCAGCTGGTTGCGAGCCTGGCGCCGCAGATGACGGCGCTGCAGGCGCAGCTCAGCGTGCTGGGGCCGGCACCGGCCAAGGGCGCGCCGCCGGAGGCGCCTGAAGTGGCCGCGCAGCGCCGCCAGCAGGACAAGGCGCAAGCGGCCCTCAACGCGCAGATCGTGCAGGCGAAGTCGCTGGGGCTGGATGCCCAGCAACTGGTGGTGCAGATCACCGGCCTGCGCGACGACGCGTTCCAGGCGCGCCTCACCGCCCGCACGAACACGCCGCTGGGCCCTGTGTTCTGGTCCGACCAGGCACGCGCGCTGCCGAACGACATGCTGCGCGTGCAACGCCTGGCCGACCGCTGGTCCGAGGCATGGAGCGACGCCTGGGAGCCGCCGAACCGGCAGCCGCTGCTGCTGTGCTTCGCCGCCGCGTTGCTGCTGCTCGTGGCCGGCCGCTGGTCGCTGCAGCGGCTGTGGCAGTTCGTCGCCGCGCGCTGGCTGCCGCAAGGCCACCTGCGCCGCAGCGCGATGGCGGCGGTGATGGCGCTGTCGACCACGCTGGTGATCGGGGTGGCCGCGCAACTGGTCCACGCGGGCATCGCCTGGGGCGAAACGCTGGATGCGGATCTCGACACCATGGCCACCTCGGCGGTGCGCGCGATCTACTTCGCCGCGCTGATGGCGGGCCTGGGCAGCGCGCTGCTGTCCGCGAAGCGCGCCTCGTGGCGGCTGCTGCCGCTGTCCAACGCCGCAGCCGGACGCCTGCGCCGCTTCCCCTGGCTGATCGGCGGCGCGGCGCTGCTCACCGGCCTCACCGAGCGGGTCATCCGCAGCATCGGCTCCAGCCTGCCGGCCACGGTGTTCCTGCACGCGCTGCTGGCCTTGCTGATTACCGGGCTGGTCGCGCTCGTCCTGCTGCAGTTGCACCGCGCACGCCACGAACAGGCCGCGGCCGACGACGAGCAGGCGCCGCGGCCGTGGTGGTCGGGCGTACTCAGGCTCGGAGCCACGCTGGGCGTGGGTCTGTGCTGGCTGGCGGTCTGCCTGGGCTATATCGCGCTGGCGTTCTTCATCGCCGCGCAGATGCTGTGGACGGGCCTGGTGGCGGCCAGCCTGTACCTGTTGCTGCAGCTCGCGCGCGACCTGGCCGAGGCGCTGCTGGCCTCGCGCACCCACGCCGTGCCACGCGCGAAGGCCGCCCACGACCTCCCGCCGGAGACGCAGGAACAAGTCATCACCGTGCTCGCCGGCCTGGTCCGGGTGGCCCTGGTGCTGGCCGCGCTGGCCCTGGTGCTGGCGCCGTTCTATACCGGGCCGGGAGAACTGGTGCAGCGCACGCTGCAGTTGTTCGGCAAGCTGCAACTGGGCCAGTTGCCGATCAGCGTCGGCACGATCTTCCAGGCCATCCTGGTGTTCGTGGTCGGCCTGCTGCTGCTGCGCATGCTCAAGCGCTGGCTGGCCGAGCGGCTGCTGCCCACCACGTCGATGGAAGCGGGCCTGCGCGAATCCATCGTCACCCTGCTCGGCTACCTTGGCAGCGTGCTGGTGTTCGGCCTGGCGCTGGTGGCGCTGAACGTGAACCTGCAGAGCATCGCCTGGATCGCCAGCGCGTTGTCGGTGGGCATAGGCTTCGGCCTGCAGGCGGTGGTGCAGAACTTCATCTCCGGCCTGATCCTGCTGGTGGAGCGGCCGGTGAAGGTGGGCGACTGGGTGAGCCTGTCCAGCGAGATCGAGGGCGACATCCGCCGCATCAACGTGCGCGCCACCGAGATCCAGTTGTGGGATCGCTCCACCGTGATCGTGCCGAATTCGCAGCTGATCACCCAGAACGTGCGCAACGTGACCCACGGCAGCGCGCAGGGGCGCGTGCGCATCCTGCTGCCGATGCCGCTGGACACCGACGCGGCGCGCGCGCGCCAGCTGATAGTGGACGCGCTGAAGGCGCATCCGTCGACGCTGGGCACCCCGGCGCCGATGGTGCAGCTGGACAACATCAACGCCAGCTCGATGACCTTCAGCATCGTTTCCTACGTGCGCAGCCCGCGCGACGTGGCGGCGGTGAAGAGCGACATCCTGTTCGACATCCTGCGGCGCCTGCGCGAGGCGCAGTTGCCGCTGTCCACGCCGCAGAGCATGGTGGTGCGCACGCTGGGCCCGCTGGGCGAGGACAGCCCCGCCGTGCCATCGCAGACTTCGTGA
PROTEIN sequence
Length: 818
MRTPFCRLPALPAFLLALVLALGASPARAQAEPDTPAPAATPAQILQQSSDQLDAVKKALADAQKNKAASPSPPLADLRTSTLQVQDQARQLVASLAPQMTALQAQLSVLGPAPAKGAPPEAPEVAAQRRQQDKAQAALNAQIVQAKSLGLDAQQLVVQITGLRDDAFQARLTARTNTPLGPVFWSDQARALPNDMLRVQRLADRWSEAWSDAWEPPNRQPLLLCFAAALLLLVAGRWSLQRLWQFVAARWLPQGHLRRSAMAAVMALSTTLVIGVAAQLVHAGIAWGETLDADLDTMATSAVRAIYFAALMAGLGSALLSAKRASWRLLPLSNAAAGRLRRFPWLIGGAALLTGLTERVIRSIGSSLPATVFLHALLALLITGLVALVLLQLHRARHEQAAADDEQAPRPWWSGVLRLGATLGVGLCWLAVCLGYIALAFFIAAQMLWTGLVAASLYLLLQLARDLAEALLASRTHAVPRAKAAHDLPPETQEQVITVLAGLVRVALVLAALALVLAPFYTGPGELVQRTLQLFGKLQLGQLPISVGTIFQAILVFVVGLLLLRMLKRWLAERLLPTTSMEAGLRESIVTLLGYLGSVLVFGLALVALNVNLQSIAWIASALSVGIGFGLQAVVQNFISGLILLVERPVKVGDWVSLSSEIEGDIRRINVRATEIQLWDRSTVIVPNSQLITQNVRNVTHGSAQGRVRILLPMPLDTDAARARQLIVDALKAHPSTLGTPAPMVQLDNINASSMTFSIVSYVRSPRDVAAVKSDILFDILRRLREAQLPLSTPQSMVVRTLGPLGEDSPAVPSQTS*