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SCNpilot_cont_750_bf_scaffold_519

Search features with annotation key words

Displaying items 1-30 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_519_1
unknown

Not on your lists

comp(27..704)
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(777..2327)
DNA (1551bp) protein (517aa)
PepSY-associated TM helix domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5M5_9GAMM rbh
PepSY-associated TM helix domain-containing protein {ECO:0000313|EMBL:EIL94766.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PepSY-associated TM helix domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_519_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2341..2604)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02433.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2604..2906)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ74_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01616.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2939..5065)
DNA (2127bp) protein (709aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU3_9GAMM rbh
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL89234.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent receptor protein; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_750_bf_scaffold_519_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..5985)
DNA (621bp) protein (207aa)
Methionine-R-sulfoxide reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA3_9GAMM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIM03045.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methionine-R-sulfoxide reductase
SCNpilot_cont_750_bf_scaffold_519_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6231..7958)
DNA (1728bp) protein (576aa)
Redoxin domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU1_9GAMM rbh
Redoxin domain-containing protein {ECO:0000313|EMBL:EIL89232.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c biogenesis protein
SCNpilot_cont_750_bf_scaffold_519_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8096..8743
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DE9C15
RNA polymerase, sigma subunit, ECF family
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AGG89768.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8749..9402
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89230.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_10
unknown

Not on your lists

9485..9781
DNA (297bp) protein (99aa)
Pentapeptide MXKDX repeat-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT8_9GAMM
SCNpilot_cont_750_bf_scaffold_519_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9884..10966
DNA (1083bp) protein (361aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P0_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL94781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-nitropropane dioxygenase-like enzyme rbh
SCNpilot_cont_750_bf_scaffold_519_12
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11040..11693
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA6_9GAMM
Guanosine polyphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KGM57047.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11787..12173
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT6_9GAMM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
iojap-like ribosome-associated protein
SCNpilot_cont_750_bf_scaffold_519_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12598..13071
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomo
50S rRNA methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000348AC74
rRNA large subunit m3Psi methyltransferase RlmH
SCNpilot_cont_750_bf_scaffold_519_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13079..13729)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003817F4C rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13925..14374
DNA (450bp) protein (150aa)
Acetyltransferase, GNaT family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT3_9GAMM
Acetyltransferase, GNaT family protein {ECO:0000313|EMBL:EIL89224.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyltransferase
SCNpilot_cont_750_bf_scaffold_519_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14386..14955
DNA (570bp) protein (190aa)
Maf-like protein UUA_03793 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ88_9GAMM
Maf-like protein UUA_03793 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MAF protein
SCNpilot_cont_750_bf_scaffold_519_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14957..15769)
DNA (813bp) protein (271aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE2_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIL87333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative metal-dependent membrane protease
SCNpilot_cont_750_bf_scaffold_519_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15963..16739
DNA (777bp) protein (259aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P7_9GAMM
Putative methyltransferase {ECO:0000313|EMBL:EIL94788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16850..18400
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003154A02 rbh
Membrane protein {ECO:0000313|EMBL:AHX12423.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
membrane protein TerC, possibly involved in tellurium resistance rbh
SCNpilot_cont_750_bf_scaffold_519_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18416..18811)
DNA (396bp) protein (132aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT0_9GAMM
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:EIL89221.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MAPEG family
SCNpilot_cont_750_bf_scaffold_519_22
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18908..19774
DNA (867bp) protein (289aa)
metallopeptidase n=1 Tax=Dyella japonica RepID=UPI00031AEC4E rbh
Metallopeptidase {ECO:0000313|EMBL:AIF47435.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative metalloprotease
SCNpilot_cont_750_bf_scaffold_519_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19989..20375
DNA (387bp) protein (129aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC0_9GAMM
putative Fe-S oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EIM01634.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20415..21212)
DNA (798bp) protein (266aa)
aromatic ring-opening dioxygenase (EC:1.-.-.-) rbh
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPS6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89217.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_519_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21345..23213)
DNA (1869bp) protein (623aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA/RNA helicase, superfamily II (EC:5.99.1.-) rbh
RNA helicase n=1 Tax=Dyella japonica RepID=UPI00031DF4BE rbh
SCNpilot_cont_750_bf_scaffold_519_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23323..24072
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D4611 rbh
Oxidoreductase {ECO:0000313|EMBL:AIF47442.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_750_bf_scaffold_519_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24074..24628
DNA (555bp) protein (185aa)
acetyltransferase, ribosomal protein N-acetylase; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI84_9GAMM
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EIL86925.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_519_28
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24638..25981)
DNA (1344bp) protein (448aa)
RNA helicase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BECAD rbh
RNA helicase {ECO:0000313|EMBL:AIF47446.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
DNA/RNA helicase, superfamily II
SCNpilot_cont_750_bf_scaffold_519_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26131..26817)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00116.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
SCNpilot_cont_750_bf_scaffold_519_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26900..28153
DNA (1254bp) protein (418aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX3_9GAMM rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM00115.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
arabinose efflux permease family protein rbh
Displaying items 1-30 of 248 in total

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