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SCNpilot_cont_750_bf_scaffold_519

Search features with annotation key words

Displaying items 31-60 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_519_31
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28191..28676
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX2_9GAMM rbh
FKBP-type peptidyl-prolyl cis-trans isomerase
SCNpilot_cont_750_bf_scaffold_519_32
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28921..29481)
DNA (561bp) protein (187aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI8_9GAMM
Hydrolase {ECO:0000313|EMBL:AHX12443.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cell wall-associated hydrolase, invasion-associated protein
SCNpilot_cont_750_bf_scaffold_519_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29557..30783)
DNA (1227bp) protein (409aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD1_9GAMM rbh
TonB family protein rbh
TonB family protein {ECO:0000313|EMBL:AGG88318.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_34
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30785..31171)
DNA (387bp) protein (129aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ0_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_35
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31242..32573)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKW6_9GAMM rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_36
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32664..33923
DNA (1260bp) protein (420aa)
dadA; D-amino acid dehydrogenase subunit; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
D-amino acid dehydrogenase subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKW5_9GAMM rbh
Amino acid dehydrogenase {ECO:0000313|EMBL:AHX12445.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_519_37
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34194..34451
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DE1EE4
Uncharacterized protein {ECO:0000313|EMBL:AIF47457.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_519_38
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34688..35119)
DNA (432bp) protein (144aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD6_9GAMM
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AGG88323.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_39
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35116..35778)
DNA (663bp) protein (221aa)
Carbonic anhydrase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5R3_9GAMM
carbonic anhydrase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_519_40
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35789..37255)
DNA (1467bp) protein (489aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKV5_9GAMM rbh
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM00097.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_519_41
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37346..38134)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA1_9GAMM
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88692.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
SCNpilot_cont_750_bf_scaffold_519_42
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38166..38480)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88691.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_43
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38483..39328)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN99_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL88690.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Maltose operon periplasmic protein precursor (MalM)
SCNpilot_cont_750_bf_scaffold_519_44
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39337..40752)
DNA (1416bp) protein (472aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22) rbh
Asparagine--tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W524_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_519_45
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40918..41244
DNA (327bp) protein (109aa)
iron-sulfur cluster assembly protein n=1 Tax=Dyella japonica RepID=UPI0003081136
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:AHX12455.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Iron-sulfur cluster assembly accessory protein
SCNpilot_cont_750_bf_scaffold_519_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41462..41890
DNA (429bp) protein (143aa)
30S ribosomal protein S6 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB2_9GAMM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SSU ribosomal protein S6P
SCNpilot_cont_750_bf_scaffold_519_47
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41905..42060
DNA (156bp) protein (52aa)
30S ribosomal protein S18 n=1 Tax=Dyella RepID=UPI0003092617
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SSU ribosomal protein S18P
SCNpilot_cont_750_bf_scaffold_519_48
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


42222..42674
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S2_9GAMM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LSU ribosomal protein L9P
SCNpilot_cont_750_bf_scaffold_519_49
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42976..44370
DNA (1395bp) protein (465aa)
primary replicative DNA helicase (EC:3.6.1.-) rbh
Primary replicative DNA helicase {ECO:0000313|EMBL:AGG88334.1}; EC=3.6.1.- {ECO:0000313|EMBL:AGG88334.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Primary replicative DNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCG5_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_519_50
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44540..45628
DNA (1089bp) protein (363aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] rbh
Alanine racemase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W518_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_519_51
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45832..47208
DNA (1377bp) protein (459aa)
DNA repair protein RadA n=1 Tax=Dyella ginsengisoli RepID=UPI00034CCFC1 rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA repair protein RadA rbh
SCNpilot_cont_750_bf_scaffold_519_52
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(47831..48094)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Dyella RepID=UPI0002E2F7D5
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
SCNpilot_cont_750_bf_scaffold_519_53
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48299..49906
DNA (1608bp) protein (536aa)
Integral membrane protein MviN n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4L3_9GAMM rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
integral membrane protein MviN rbh
SCNpilot_cont_750_bf_scaffold_519_54
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49930..50883
DNA (954bp) protein (318aa)
FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Riboflavin kinase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKV0_9GAMM
SCNpilot_cont_750_bf_scaffold_519_55
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51067..53928
DNA (2862bp) protein (954aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTR3_9GAMM
SCNpilot_cont_750_bf_scaffold_519_56
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54144..54644
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W818_9GAMM
SCNpilot_cont_750_bf_scaffold_519_57
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54671..55630
DNA (960bp) protein (320aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W819_9GAMM rbh
SCNpilot_cont_750_bf_scaffold_519_58
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56395..56658
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DFC568
Uncharacterized protein {ECO:0000313|EMBL:KGK58427.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
SCNpilot_cont_750_bf_scaffold_519_59
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56662..57165
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002FE6297
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AER55603.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_750_bf_scaffold_519_60
unknown

Not on your lists

57162..57290
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying items 31-60 of 248 in total

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