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SCNpilot_cont_750_bf_scaffold_519

Search features with annotation key words

Displaying items 121-150 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_519_121
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129766..130554)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003461E0D rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG89511.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_122
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130559..131329)
DNA (771bp) protein (257aa)
Putative short chain dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ5_9GAMM rbh
Putative short chain dehydrogenase {ECO:0000313|EMBL:EIL94258.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
SCNpilot_cont_750_bf_scaffold_519_123
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131332..131625)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EBE002
Membrane protein {ECO:0000313|EMBL:AHX12694.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_124
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131770..133230)
DNA (1461bp) protein (487aa)
aldehyde dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B77B90
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJV27739.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_519_125
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133478..135481)
DNA (2004bp) protein (668aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD70_9GAMM rbh
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97411.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase rbh
SCNpilot_cont_750_bf_scaffold_519_126
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135600..137909)
DNA (2310bp) protein (770aa)
folate hydrolase n=1 Tax=Dyella japonica RepID=UPI0002F0E3DF rbh
Folate hydrolase {ECO:0000313|EMBL:AIF48769.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative aminopeptidase rbh
SCNpilot_cont_750_bf_scaffold_519_127
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137965..139401)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD68_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97409.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_bf_scaffold_519_128
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139508..140626)
DNA (1119bp) protein (373aa)
chitinase (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14]
Chitinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH04_9GAMM rbh
Chitinase {ECO:0000313|EMBL:EIL98745.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_750_bf_scaffold_519_129
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140733..140918
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003465B6E
Oxidoreductase-like protein, N-terminal domain protein {ECO:0000313|EMBL:KCB37334.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
Hyp domain-containing protein 2
SCNpilot_cont_750_bf_scaffold_519_130
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140982..141962
DNA (981bp) protein (327aa)
Flavin-dependent oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97402.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
luciferase family oxidoreductase, group 1 rbh
SCNpilot_cont_750_bf_scaffold_519_131
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142128..142595)
DNA (468bp) protein (156aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH11_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
SCNpilot_cont_750_bf_scaffold_519_132
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142657..143400)
DNA (744bp) protein (248aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFE2_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIL98183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione S-transferase rbh
SCNpilot_cont_750_bf_scaffold_519_133
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143574..145583
DNA (2010bp) protein (670aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF87_9GAMM rbh
Oligopeptide transporter, OPT family protein {ECO:0000313|EMBL:EIL98128.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative oligopeptide transporter, OPT family rbh
SCNpilot_cont_750_bf_scaffold_519_134
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145686..148352
DNA (2667bp) protein (889aa)
hypothetical protein; K14205 phosphatidylglycerol lysyltransferase [EC:2.3.2.3] rbh
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89051.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_bf_scaffold_519_135
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148379..149167
DNA (789bp) protein (263aa)
Virulence protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB1_9GAMM
Virulence protein {ECO:0000313|EMBL:EIL89052.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
virulence factor family protein
SCNpilot_cont_750_bf_scaffold_519_136
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149164..150231
DNA (1068bp) protein (356aa)
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB2_9GAMM rbh
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EIL89053.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
16S RNA G1207 methylase RsmC rbh
SCNpilot_cont_750_bf_scaffold_519_137
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150228..150947
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD53_9GAMM
SCNpilot_cont_750_bf_scaffold_519_138
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150965..151471)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00036B5CD3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT47131.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
SCNpilot_cont_750_bf_scaffold_519_139
unknown

Not on your lists

comp(151550..151840)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_140
unknown

Not on your lists

comp(151878..152225)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_519_141

Not on your lists

comp(152261..153019)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZKF9_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD30320.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_142
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153036..153815)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGU3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90114.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_143
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154051..156717
DNA (2667bp) protein (889aa)
Serine/threonine protein kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYA0_9GAMM rbh
transcriptional regulatory protein,protein kinase family protein rbh
Transcriptional regulatory protein,protein kinase family protein {ECO:0000313|EMBL:AGG90115.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_144
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157046..158287
DNA (1242bp) protein (414aa)
rsbU; serine phosphatase, regulator of sigma subunit (EC:3.1.3.3) rbh
Serine phosphatase, regulator of sigma subunit, protein {ECO:0000313|EMBL:ADJ65219.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ADJ65219.1};; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
Serine phosphatase, regulator of sigma subunit, protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IR93_HERSS rbh
SCNpilot_cont_750_bf_scaffold_519_145
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158296..158850
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003715D27
Uncharacterized protein {ECO:0000313|EMBL:KDP85170.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_519_146
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158852..159256
DNA (405bp) protein (135aa)
Putative lipoprotein n=1 Tax=Burkholderia sp. YI23 RepID=G8MP82_9BURK
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AET94621.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_750_bf_scaffold_519_147
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159256..159960
DNA (705bp) protein (235aa)
diguanylate cyclase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F3BFA6
diguanylate cyclase
GGDEF domain containing protein {ECO:0000313|EMBL:ADJ65216.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
SCNpilot_cont_750_bf_scaffold_519_148
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160362..161303)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EFB6A1
Peroxidase {ECO:0000313|EMBL:KJC59638.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
iron-dependent peroxidase; K07223 putative iron-dependent peroxidase
SCNpilot_cont_750_bf_scaffold_519_149
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161364..162476)
DNA (1113bp) protein (371aa)
Ribonuclease D n=1 Tax=Rhodanobacter denitrificans RepID=M4NPD8_9GAMM rbh
ribonuclease D rbh
Ribonuclease D {ECO:0000313|EMBL:AGG89506.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_519_150
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162551..164491
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NF66_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89505.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 121-150 of 248 in total

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