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SCNpilot_cont_750_bf_scaffold_519_144

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 157046..158287

Top 3 Functional Annotations

Value Algorithm Source
rsbU; serine phosphatase, regulator of sigma subunit (EC:3.1.3.3) similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 414.0
  • Bit_score: 386
  • Evalue 1.10e-104
  • rbh
Serine phosphatase, regulator of sigma subunit, protein {ECO:0000313|EMBL:ADJ65219.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ADJ65219.1};; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 414.0
  • Bit_score: 386
  • Evalue 4.80e-104
Serine phosphatase, regulator of sigma subunit, protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IR93_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 414.0
  • Bit_score: 386
  • Evalue 3.40e-104
  • rbh

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGCAACGTCAGTGCAAATCACGCCGGGAATGCGGGGGTATGGACCGGCCGAGATACAGTGCGCCGCAAGCCTCTGCCGGCCGGGGCCCACGGTCGCGCCCACGGACACGAATGCGACCGTACGCGACCTGTTCGACCGGCATCGGGAGCTGATCAGCCTGCCGGTGATCGACGGCACGCGCGCGTGCGGCCTGATCAAGCGGCGCACGTTCCAGTCCGAGATGGCCAAGCCATTCCGCCAGGAGCTGCACGAGCACAAGAGCTGCGTCGCCTTCATGGACGGGCAACCGCTGATCATCGAGGCGGAAACGTCGATCGAGCGCACGGCGAAACTGGTGGCCGACAGCCACACGGACGCCCTCGCCGACGGTTTTCTGGTGGTGCGCGGCAACGAGTTCCTCGGCATAGGTTTCGGCCTCGACCTGATGCGCAAGGTCGCCGACCAGCAGGAGGCGAGGAATCGCCAGATCATGCAGAGCATCGACTACGCGAGCGTCATCCAGCGCGCGATGCTGCAGACTTCGCAGGAGATCCTGAAGGCGGAGCTGCCGGATTCGGCGATCGTGTGGCAGCCGCGCGACACGGTCGGAGGCGATTTTTTCCAGTGCGCCAAATTCGACCATGGCGTCTTCATCGCGATGGCGGACTGCACCGGACACGGCGTGCCCGGCGCCTTCATGACGCTGATCTCGTCGTCGTGGCTGGCCCAGGCGCTGGAACGCGATGGCCCCGCCGACCCCGCGCAGTTGCTCGGCACGCTCAACCGCAAGATCAAGCAATCGCTCGGGCAGATCGGCTCGCGGGTTGTCGGCGAGCAATCCGACGATGGCCTGGATGCCTTGTTCATGTGGCTCAATCGCCGGGACCGCGTGGTGACCTATGCCGGTGCGCGCATGCCGCTGCATGTGCTTCCGGATGGGGCGGCGACGGTCATCACGCACGAAACGGATCGTGTCGGCGTCGGCTACGTCGGCACGCCGATCGACCACCGCTGGAAAAACCGCACGTTGACCCTGCAGCAGGACGACCTGCTGTACGCGACCACCGACGGCCTGACCGACCAGATCGGCGGCTCCCGGAACATCGGCTTCGGCAAGCGTCGCCTGCGCCAATGGCTGCTCGATTGCCGCGACATGCCGGCGCCTGCACAGGTCGCCGCGATCATGCAGGCGCATGCCGAGTACCAGGGGCAGCACCGGCGCCGCGACGACGTCTCCCTCATCTGCCTGCGCGTGCCCTGA
PROTEIN sequence
Length: 414
MATSVQITPGMRGYGPAEIQCAASLCRPGPTVAPTDTNATVRDLFDRHRELISLPVIDGTRACGLIKRRTFQSEMAKPFRQELHEHKSCVAFMDGQPLIIEAETSIERTAKLVADSHTDALADGFLVVRGNEFLGIGFGLDLMRKVADQQEARNRQIMQSIDYASVIQRAMLQTSQEILKAELPDSAIVWQPRDTVGGDFFQCAKFDHGVFIAMADCTGHGVPGAFMTLISSSWLAQALERDGPADPAQLLGTLNRKIKQSLGQIGSRVVGEQSDDGLDALFMWLNRRDRVVTYAGARMPLHVLPDGAATVITHETDRVGVGYVGTPIDHRWKNRTLTLQQDDLLYATTDGLTDQIGGSRNIGFGKRRLRQWLLDCRDMPAPAQVAAIMQAHAEYQGQHRRRDDVSLICLRVP*