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SCNpilot_cont_750_bf_scaffold_519_137

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 150228..150947

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 232.0
  • Bit_score: 386
  • Evalue 2.80e-104
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 232.0
  • Bit_score: 381
  • Evalue 2.00e-103
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD53_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 232.0
  • Bit_score: 386
  • Evalue 2.00e-104

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAAACTGGTCAAGCTGATCGCGAACCTGGGCTACGGCAGCCGCAAGGACGTGGCCTGGATGTTCCGCGAGGGCCGCATCACCGACGCCGATGGCGAAGTGTTGTATGCCGACGACAAGGTCGAGCATGCGGCGATCCACGTCGATGGCGAACCGCTCGATCCGCCGCCCGGCCTGGTGCTGATGATGCACAAGCCGCTGGGCGTCACCTGTTCGCGCAAGGACGCGGGGCGCGTGATCTACGACCTGCTGCCGCCGCGCTACCGCGTGCGCGAACCAGCGCTGTCCACCGTGGGGCGGCTCGACCGCGACACCGCGGGCCTGCTGCTGTTCACCGACGACGGCGCGCTGCTGCACCGGATCATCTCGCCCAGGGCCAACGTGGCCAAGGTCTACGAGGCCACCCTGGCCGAAGACCTGCGCGGCGACGAAGCCGCGCTGTTCGCCAGCGGCACGCTGCTGCTGGAATCGGAAACCACGCCGCTCGCTCCCGCCGCGCTGGACGTACTGGGCCCGCGCCATGCGCGACTGGTCCTGCACGAAGGCCGCTACCACCAGGTGCGCCGCATGTTCGCCGCCACCGGCAACCGGGTGGAAACCCTGCAGCGCGTGGCGATAGGCGCACTCACGCTGGGCGAACTGGCGCCGGGCGCGTGGCGTGCGCTGGATGCCGCGGAAGTGGAGCGGATCTTCGCCGCTACGCCTGTGTCGAGGACGTAG
PROTEIN sequence
Length: 240
MKLVKLIANLGYGSRKDVAWMFREGRITDADGEVLYADDKVEHAAIHVDGEPLDPPPGLVLMMHKPLGVTCSRKDAGRVIYDLLPPRYRVREPALSTVGRLDRDTAGLLLFTDDGALLHRIISPRANVAKVYEATLAEDLRGDEAALFASGTLLLESETTPLAPAALDVLGPRHARLVLHEGRYHQVRRMFAATGNRVETLQRVAIGALTLGELAPGAWRALDAAEVERIFAATPVSRT*