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SCNpilot_cont_750_bf_scaffold_586_1

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(2..619)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 193.0
  • Bit_score: 362
  • Evalue 4.80e-97
RNAse PH (EC:2.7.7.56) similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 193.0
  • Bit_score: 356
  • Evalue 5.90e-96
Ribonuclease PH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNI7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 193.0
  • Bit_score: 362
  • Evalue 3.40e-97

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGTAAACTTTCCGACCCCGAGTTGCCCAACGGCCCACATGAACCAGTCCGTCCGACCCAGCGGTCGCGCCAGCGACCAGTTGCGCACCGTCGCCATCGAACGCCACTACACCCGCCACGCCGAAGGCTCGGTGCTGGTGAGCTTCGGCGACACCCGCGTGCTGTGCACCGCCAGCATCGAGGATCGCGTGCCGCAATGGCTGCGCGGCAAGGGCGAGGGCTGGGTCACCGCCGAATACGGCATGCTGCCGCGCGCCACCCACACCCGCATGCAGCGCGAAGCCGCGCGCGGCGGCCAGGGCGGCCGCACCATGGAGATCCAGCGCCTGATCGGCCGCAGCCTGCGCGCCTGCATCAACCGCCAGGCGCTGGGCGAACGCGTGGTCACGCTGGACTGCGACGTGATCCAGGCCGACGGCGGCACCCGCACCGCCGCGATCACCGGCGCCTACGTGGCCCTGGCCGACGCGGTGAACGCGCTGATGCAGCGCGAGAACCTCAAGCGCAACCCGATCGTGGGCGCGGTGGCCGCGGTATCCGTGGGCATCTACAAGGGCGTGCCGGTGCTCGACCTCGACTACGCCGAGGATTCGGACTGCGACACCGACATGAACGTG
PROTEIN sequence
Length: 206
MVNFPTPSCPTAHMNQSVRPSGRASDQLRTVAIERHYTRHAEGSVLVSFGDTRVLCTASIEDRVPQWLRGKGEGWVTAEYGMLPRATHTRMQREAARGGQGGRTMEIQRLIGRSLRACINRQALGERVVTLDCDVIQADGGTRTAAITGAYVALADAVNALMQRENLKRNPIVGAVAAVSVGIYKGVPVLDLDYAEDSDCDTDMNV