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SCNpilot_cont_750_bf_scaffold_586

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_586_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..619)
DNA (618bp) protein (206aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNI7_9GAMM
SCNpilot_cont_750_bf_scaffold_586_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..1508
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93611.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR00255 family protein rbh
SCNpilot_cont_750_bf_scaffold_586_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1811..2506
DNA (696bp) protein (232aa)
Fe(2+)/Mn(2+) transporter pcl1 n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PYL3_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig143, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53440.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2829..3449
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2B9_9GAMM
SCNpilot_cont_750_bf_scaffold_586_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3518..4345
DNA (828bp) protein (276aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1C2_9GAMM rbh
Toluene ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX15812.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component
SCNpilot_cont_750_bf_scaffold_586_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4342..5115
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1C3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93264.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_586_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5167..6036
DNA (870bp) protein (290aa)
Organic solvent resistance ABC transporter periplasmic protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1C4_9GAMM rbh
Organic solvent resistance ABC transporter periplasmic protein {ECO:0000313|EMBL:EIL93265.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component rbh
SCNpilot_cont_750_bf_scaffold_586_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6074..6757
DNA (684bp) protein (228aa)
toluene tolerance protein n=1 Tax=Dyella japonica RepID=UPI0002DA4260 rbh
Toluene tolerance protein {ECO:0000313|EMBL:AIF46820.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ABC-type transport system involved in resistance to organic solvents, auxiliary component rbh
SCNpilot_cont_750_bf_scaffold_586_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7055
DNA (309bp) protein (103aa)
Putative NTP binding protein (Contains STAS domain) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH9_9GAMM
putative NTP binding protein (contains STAS domain)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_586_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7132..7977)
DNA (846bp) protein (282aa)
ABC transporter n=1 Tax=Dyella ginsengisoli RepID=UPI0003489E12 rbh
Surface lipoprotein {ECO:0000313|EMBL:EIL98299.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
surface lipoprotein rbh
SCNpilot_cont_750_bf_scaffold_586_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..8475
DNA (291bp) protein (97aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Dyella japonica RepID=UPI0002D3BCD8
SCNpilot_cont_750_bf_scaffold_586_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8603..10771
DNA (2169bp) protein (723aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFQ6_9GAMM rbh
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIL98297.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
(p)ppGpp synthetase, RelA/SpoT family
SCNpilot_cont_750_bf_scaffold_586_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10881..11264
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFQ5_9GAMM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIL98296.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
endoribonuclease L-PSP
SCNpilot_cont_750_bf_scaffold_586_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11281..13377
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-) rbh
ATP-dependent DNA helicase RecG n=1 Tax=Dyella japonica RepID=UPI000304595A rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AIF46826.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_586_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13461..14393
DNA (933bp) protein (311aa)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2A8_9GAMM
Inosine-uridine nucleoside N-ribohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_586_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14473..14718
DNA (246bp) protein (82aa)
50S ribosomal protein L31 n=1 Tax=Dyella japonica RepID=UPI0002DE0617
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ribosomal protein L31
SCNpilot_cont_750_bf_scaffold_586_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15015..16310
DNA (1296bp) protein (432aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
citrate synthase I, hexameric type (EC:2.3.3.1) rbh
type II citrate synthase n=1 Tax=Dyella japonica RepID=UPI00030590D9 rbh
SCNpilot_cont_750_bf_scaffold_586_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16403..17077)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9L1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96152.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17175..19724)
DNA (2550bp) protein (850aa)
Penicillin-binding protein, 1A family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHN1_9GAMM rbh
penicillin-binding protein, 1A family rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:AGG90409.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20006..21064
DNA (1059bp) protein (353aa)
fimbrial assembly protein n=1 Tax=Dyella japonica RepID=UPI0002D78188 rbh
Pilus assembly protein PilM {ECO:0000313|EMBL:AHX11880.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
type IV pilus assembly protein PilM
SCNpilot_cont_750_bf_scaffold_586_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21064..21810
DNA (747bp) protein (249aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2A2_9GAMM rbh
Fimbrial assembly membrane protein {ECO:0000313|EMBL:EIL93593.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein PilN rbh
SCNpilot_cont_750_bf_scaffold_586_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21807..22466
DNA (660bp) protein (220aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW6_9GAMM
Tfp pilus assembly protein PilO
Tfp pilus assembly protein PilO {ECO:0000313|EMBL:AGG90406.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22466..23008
DNA (543bp) protein (181aa)
Tfp pilus assembly protein PilP n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH9_9GAMM
Tfp pilus assembly protein PilP
Tfp pilus assembly protein PilP {ECO:0000313|EMBL:AGG90405.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23029..25299
DNA (2271bp) protein (757aa)
Type IV pilus secretin PilQ/competence protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9K5_9GAMM rbh
Type IV pilus secretin PilQ/competence protein {ECO:0000313|EMBL:EIL96146.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
type IV pilus secretin PilQ/competence protein rbh
SCNpilot_cont_750_bf_scaffold_586_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25436..26434
DNA (999bp) protein (333aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG3_9GAMM rbh
MoxR-like ATPase {ECO:0000313|EMBL:EIM01005.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase rbh
SCNpilot_cont_750_bf_scaffold_586_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26431..27378
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01004.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_586_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27375..27893
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01003.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_586_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27886..28866
DNA (981bp) protein (327aa)
Mg-chelatase subunit ChlD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG0_9GAMM
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EIM01002.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Mg-chelatase subunit ChlD
SCNpilot_cont_750_bf_scaffold_586_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28863..30776
DNA (1914bp) protein (638aa)
Tetratricopeptide repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHL9_9GAMM rbh
tetratricopeptide repeat protein rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGG90399.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_586_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30776..32557
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL51_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90049.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Displaying items 1-30 of 83 in total

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