ggKbase home page

SCNpilot_cont_750_bf_scaffold_586_11

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 8185..8475

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 180
  • Evalue 1.60e-42
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 175
  • Evalue 6.70e-42
DNA-directed RNA polymerase subunit omega n=1 Tax=Dyella japonica RepID=UPI0002D3BCD8 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 180
  • Evalue 1.10e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCACGCATTACCGTGGAGGACTGCCTGGAGGTGGTCGACAACCGATTCGAGCTGGTGTTGATGGCGACCAAGCGCGCCCGTCAGCTCGCCAAGGGTGCCGAACCGGCAGTCCATCCCGACAACGACAAGCCCTCGGTGCTGGCGCTGCGCGAGATCGCCGGCCGCCGCATCGACCAGGCCACCATCGACGAAATCGACAAGGCCGAGCGCGAGCGCGCCGAGCGCGAGGCGCTGGAGTGGGCCGCGGCCGAAGTGGACGACGATCTGTCCAAGGTCGGCGACGATTGA
PROTEIN sequence
Length: 97
MARITVEDCLEVVDNRFELVLMATKRARQLAKGAEPAVHPDNDKPSVLALREIAGRRIDQATIDEIDKAERERAEREALEWAAAEVDDDLSKVGDD*