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SCNpilot_cont_750_bf_scaffold_594_87

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: 87744..89210

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WR03_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 493.0
  • Bit_score: 760
  • Evalue 1.30e-216
  • rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 493.0
  • Bit_score: 760
  • Evalue 4.20e-217
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 493.0
  • Bit_score: 760
  • Evalue 1.90e-216

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGAAACCCGCACTGCAATTCCGCCTGCACCAGCAGCTCACCCTGACGCCGCAACTGCAACTGGCGATCCGCCTGCTGCAGTTGTCGCAGCTGGAGCTGGAGGCCGAGTTGCGGCAGCTTGCCGAAGGCAACCCGCTGCTGGAGTTCGCCGAAGAGAACGAGGACGAGGCCGGCGCCGGCGAAACCGCGCCGGAAACCGACTACGCGCCGCCGTCCGGCCCTGCCGAGGCGGCCGCCAACGACGTCGCCGACCGCGATGAGGGCGGCGACTGGTCCGACGACGGCGGCGGCAGCGTGGAGACGCCGATCGACTTCTCCAGCGGCAGCGGCAGCGGCAACAACTCGCGCGGCGACGAGGATTTCGAGCCGCAGAGCGCCGCGCCGGAAACCCTGCAGCAACACCTGCTGTGGCAGCTCAACCTCGCCGGCTTCAACCCGCGCCAGACCGCGATCGCCACGGTGATGATCGACGCGCTCAACGCGGACGGCTATCTCGCCGAAGGCATCGAGGCGGTGCGCGCGGCGCTGCCCGGCCACCTCGCGGCCGACCTGGACGAGATCGAGGCGGTGCGCCGCCGGCTGCAGGGCTTCGATCCGGTGGGCGTGGCCAGCCTGGACCTGCGCGACTGCCTGCGCAGCCAGCTGGAACAGTTCGACCCCGCCACCCCGCAGCGCGGCCTCGCGCTGGCCATCGTGGACGGCGAACTGGAGCTGCTGGCCCGCAACGACATCGCGAAACTCGCGCGCAAGCTGCACGCCGGCGAAGACGACACCGCGGCCGCGGCGGCGCTGATCCGCAGCCTGGACCCGCGCCCCGGCGCGGCGCTGGACACCACGCCGGTGGAGTACGTGGCGCCGGATGTCTACGCGGTGCGCGAGGGCAGCCGCTGGCAGGTGCGCCTGAACCCGGACGCCCAGCCCCGGCTGGGCCTGAACCAGCACTACTGCAACCTGATCGCCCGCGCCCGCGGCGACGACGCGAGCTGGATGAAGGGCCAGCTGCAGGAGGCGCGCTGGCTGCTCAAGAGCCTGGAATCGCGCGCCGACACCCTGCTCAAGGTGGCCGGCGCCATCGTGCAGCGGCAGAGCGCGTTCCTGGACTACGGCCCCGAGGCGATGCACCCGCTGGTGCTGCGCGAGGTGGCCGAGGAAGTGGGCATGCACGAATCCACCATCTCGCGCGTCACCACGCGCAAGTACCTGCATACGCCGCGCGGCACGTTCGAGCTGAAATATTTCTTCTCCAGCGGCGTGTCCACCGAGGACGGCGGCAGCGCCTCGGCCACCGCGATCCAGGCGATGCTGCGCAAGCTGATCGACGCGGAAGACGTGCGCAAGCCGCTTTCCGACCAGGCGCTGGCGGAGGAGCTGAAGAGCAAGGGCATCCAGGTGGCCCGCCGCACCGTGGCGAAATACCGCGAGGGCCTGCGCATCCCCAGTTCCAGCGAACGCCAGCGCATCGGCTGA
PROTEIN sequence
Length: 489
MKPALQFRLHQQLTLTPQLQLAIRLLQLSQLELEAELRQLAEGNPLLEFAEENEDEAGAGETAPETDYAPPSGPAEAAANDVADRDEGGDWSDDGGGSVETPIDFSSGSGSGNNSRGDEDFEPQSAAPETLQQHLLWQLNLAGFNPRQTAIATVMIDALNADGYLAEGIEAVRAALPGHLAADLDEIEAVRRRLQGFDPVGVASLDLRDCLRSQLEQFDPATPQRGLALAIVDGELELLARNDIAKLARKLHAGEDDTAAAAALIRSLDPRPGAALDTTPVEYVAPDVYAVREGSRWQVRLNPDAQPRLGLNQHYCNLIARARGDDASWMKGQLQEARWLLKSLESRADTLLKVAGAIVQRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYLHTPRGTFELKYFFSSGVSTEDGGSASATAIQAMLRKLIDAEDVRKPLSDQALAEELKSKGIQVARRTVAKYREGLRIPSSSERQRIG*