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SCNpilot_cont_750_bf_scaffold_541_29

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(31290..31868)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 152
  • Evalue 5.40e-34
2'-5' RNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NF94_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 152
  • Evalue 3.90e-34
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 152
  • Evalue 1.20e-34

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCACCGCAGCACGAGCGATTCGACCAGCGGGAACGCCGAAGGCGCGAGCAAGCTGTTTCTCGCGCTGCAGCCGGATGCGGATACCCGCCTCGCGCTGGCGCAGACCGCGGCCGCGGCGGGCATGGCGCCGGAGCGCGGGTTCCGGCGGGTGAACCCCCGGCGCTACCACGCCACCTTGCACTTCCTGGGCAGCCATCCGGCGCCGCCGCTGGGCCTCGTCGCGGGCGCGGAACGGGTGGCAGCCAGCCTGCCGGGCGGCGCGTTCGACTGGACGCTGGACCGCCTGCGCAGCTTCGACGGGCGCCAGCCGCCGCGCGTGCTGTGCGGTCGCGTGTTGCCGGAGGCCCTGCGGCGCTTGTGGCGGCAATGGCACGACCGGCTGCTGCAGGAAGTGCCGGGACTGAGGCTGGAGCGGCGCTTCGTCCCGCACGTCACGCTGGCCTACGGCGGCGCGATGCTGCCGGAAGTGGCGGTGGCGCCGCTGCGTTGGCCGGTGCGCGAACTCGCGCTGCTGGAAAGCCGCACCGGCGAGCGGGACTATCGTCAATTGGCCAGTTGGCCGCTGCGGCAGGATTGA
PROTEIN sequence
Length: 193
MHRSTSDSTSGNAEGASKLFLALQPDADTRLALAQTAAAAGMAPERGFRRVNPRRYHATLHFLGSHPAPPLGLVAGAERVAASLPGGAFDWTLDRLRSFDGRQPPRVLCGRVLPEALRRLWRQWHDRLLQEVPGLRLERRFVPHVTLAYGGAMLPEVAVAPLRWPVRELALLESRTGERDYRQLASWPLRQD*