ggKbase home page

SCNpilot_cont_750_bf_scaffold_547_32

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(39322..40839)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein id=12494310 bin=THIO_HI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 409.0
  • Bit_score: 665
  • Evalue 4.60e-188
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35783.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 488.0
  • Bit_score: 643
  • Evalue 3.50e-181
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 488.0
  • Bit_score: 639
  • Evalue 6.60e-181
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGGTGCTTCGCACGGTCCGCATGCCGATGCCCGCACGGCGGCTGCCGCGCCACGGCCCCGGGACTCCATCCTGCCGTGGCGACATGCCCTGGCCGCCTCCATCCTCTTGGCACTCTCCGGCTGCGCTTCCCTGGCGCCGCGGTACGAGGCGCCACGATTGCCCGTGCCGGACGCGTGGCTGGACAGTGCGCAAGGCGTGTCGGGACATGCCGCCCCGGTCCTCGCATGGAACGACTATTTCACCGACCCCGTGTTGAAGCAGTTGATCCAGACCGCGCTGGACAACAACCGGGACTTGCGGGTGGCCTTGCTGCGGGTCGAGGAAGCCCGCGCTTCATACCGGATCCAGCGTGCCGAACTGTTCCCGCAGGTCAACGCGGGGGTGCGGGGCACCCGGGCCAGGGTCCCGGGCGATCTCAACCTGAGCGGAAGCCCGGTCACCAGCGCGGAGTACCGCGCCGAGGTCGGTGCGAGCAGCTGGGAACTGGACCTGTGGGGGCGGGTGCGCAACCTCGACGACTCGGCATTGCAGCAGTGGCTGGCCACGCAGGCAGGCAGTCGGGCGGCGCGCATGGCGTTGATCGCCCAGGTCGCCGACGCTTACCTGGGCGTGCGCGACGTGGACGAGCGCCTGGCGCTGGCCCGGCGCACCGTCGAGACCCGGCAGCAAACGTCCCGCATCTTCAACCGTCGCTTCGAGGTGGGAGCGATCTCCAAGCTGGATCTCACGCAGGTCCAGTTGCTGCTGAACCAGGCGCAGACCCTGCTGGCGCAACTGGAACAGGCGCGCGCGACGCAGGTCCATGCGCTGGGCCTGCTCATCGGCGCCCATCCCGGCCCGCTGCCCGAGGCGGCCCCGTTCGGCGAAACCATGGAACTGGCCGAGCTGGCGCCGGGCCTGCCCTCGGAACTGCTGACGGCCCGCCCCGACATCGTGGCCGCCGAACACCGCCTGATCGCGGCGCACGCGGACATCGGCGCGGCGCGCGCGGCCTTCTTTCCGCGCATCGCACTGACCGGCAGCCTGGGCACGGCCAGCGCCGAACTCGACGGACTGTTCTCGTCCGGCAGCCGGGCCTGGTCGTTCGCCCCGGTGATATCGCTGCCGATCTTCGATGGCGGCCGGCGGCGGGCCAACCTGGAGCTGTCGGAGGTTCGCCGCGACATCGCCGTGGCGGAGTACGAAAAGAGCATCCAGACCGCGTTCCGGGAGGTTTCCGACGCCTTGTCCGCACGCCGCTGGCTGACCGAGCAACGCGACCTGCAACGCACGGCGCTGGTTACCGCCCGCGAGCGCGCGCGGCTGGCCCAGCTGCGCTACGACAACGGCTCGGTCGCGTACCTGGAGGTGCTCGATGCGCAACGCGAATTGCTGAGCGCCGAGCAGCAACTGGTCCAGGCCCGGCGCGCCCTGCTGTCGAACCAGGTGTCGCTGTACGCGGCGCTGGGCGGCGGAACGCAATCCGGCCCCCGGAGCACTGCGGCGCCAGGTTCCGTCTCCGCATCTCCCCGTTAA
PROTEIN sequence
Length: 506
MGASHGPHADARTAAAAPRPRDSILPWRHALAASILLALSGCASLAPRYEAPRLPVPDAWLDSAQGVSGHAAPVLAWNDYFTDPVLKQLIQTALDNNRDLRVALLRVEEARASYRIQRAELFPQVNAGVRGTRARVPGDLNLSGSPVTSAEYRAEVGASSWELDLWGRVRNLDDSALQQWLATQAGSRAARMALIAQVADAYLGVRDVDERLALARRTVETRQQTSRIFNRRFEVGAISKLDLTQVQLLLNQAQTLLAQLEQARATQVHALGLLIGAHPGPLPEAAPFGETMELAELAPGLPSELLTARPDIVAAEHRLIAAHADIGAARAAFFPRIALTGSLGTASAELDGLFSSGSRAWSFAPVISLPIFDGGRRRANLELSEVRRDIAVAEYEKSIQTAFREVSDALSARRWLTEQRDLQRTALVTARERARLAQLRYDNGSVAYLEVLDAQRELLSAEQQLVQARRALLSNQVSLYAALGGGTQSGPRSTAAPGSVSASPR*