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SCNpilot_cont_750_bf_scaffold_1415

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1415_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..779
DNA (777bp) protein (259aa)
Ribose/xylose/arabinose/galactoside ABCtransporters, permease components n=1 Tax=Microbacterium sp. TS-1 RepID=U2XPX6_9MICO
Ribose/xylose/arabinose/galactoside ABCtransporters, permease components {ECO:0000313|EMBL:GAD35100.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ribose/xylose/arabinose/galactoside ABC transporters, permease components; K02057 simple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_1415_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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776..1837
DNA (1062bp) protein (354aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEL8_MICTS
ribose/xylose/arabinose/galactoside ABC transporters, permease components; K02057 simple sugar transport system permease protein
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components {ECO:0000313|EMBL:BAJ75103.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_750_bf_scaffold_1415_3
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1875..3299
DNA (1425bp) protein (475aa)
sugar ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000364C8D9
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EZP27635.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_cont_750_bf_scaffold_1415_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3503..4180
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003729B1C
Transcriptional regulator {ECO:0000313|EMBL:EZP27634.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1415_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4199..5197)
DNA (999bp) protein (333aa)
transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002D3C4AF rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
corA; Mg2+ and Co2+ transporters; K03284 magnesium transporter rbh
SCNpilot_cont_750_bf_scaffold_1415_6
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5250..5807)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RR05_MYCRN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV73930.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_cont_750_bf_scaffold_1415_7
unknown

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6015..6260
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1415_8
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6376..7815
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8A8_9MICO
Contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94467.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
HNH endonuclease
SCNpilot_cont_750_bf_scaffold_1415_9
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7960..8544)
DNA (585bp) protein (195aa)
GCN5 family acetyltransferase n=1 Tax=Salinispora tropica RepID=UPI000370F4FB
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABP54749.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
SCNpilot_cont_750_bf_scaffold_1415_10
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8592..9527)
DNA (936bp) protein (312aa)
Alpha/beta hydrolase domain protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UNZ3_9ACTO rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KJR12139.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
esterase LipW rbh
SCNpilot_cont_750_bf_scaffold_1415_11
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9524..9853)
DNA (330bp) protein (110aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBL9_KINRD
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AJE38731.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
SCNpilot_cont_750_bf_scaffold_1415_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9952..10872)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00036D286C rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KGM01286.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Shy25-AraC-family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_1415_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10998..11780
DNA (783bp) protein (261aa)
short-chain dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5D783 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXG82039.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_1415_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11777..12610
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000380B1BC rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB30599.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_750_bf_scaffold_1415_15

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comp(12716..13315)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003103F96 rbh
Bacterial regulatory proteins, tetR family {ECO:0000313|EMBL:AIA16811.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tcmR; HTH-type transcriptional regulator tcmR
SCNpilot_cont_750_bf_scaffold_1415_16

Not on your lists

13386..14660
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCN5_9MICO rbh
TetA {ECO:0000313|EMBL:AIA16810.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tetA; tetracycline resistance protein, class C
SCNpilot_cont_750_bf_scaffold_1415_17
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14728..15288
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase id=7719751 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative oxidoreductase {ECO:0000313|EMBL:GAB39381.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
NADPH-dependent FMN reductase
SCNpilot_cont_750_bf_scaffold_1415_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15397..15807
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365D83D
Uncharacterized protein {ECO:0000313|EMBL:KHK95143.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
LuxR family transcriptional regulator
Displaying 18 items

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