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SCNpilot_cont_750_bf_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_571_1
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
aldehyde dehydrogenase, partial n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B64D15
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EJZ08977.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
succinate-semialdehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_571_2

Not on your lists

476..1204
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B793CF rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21647.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_571_3
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1343..3061
DNA (1719bp) protein (573aa)
sigma 54 type regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5D1DD rbh
sigma 54 type regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:CKH79483.1}; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
SCNpilot_cont_750_bf_scaffold_571_4

Not on your lists

comp(3063..4121)
DNA (1059bp) protein (353aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000346A3C3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21642.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
inner-membrane translocator
SCNpilot_cont_750_bf_scaffold_571_5

Not on your lists

comp(4118..6688)
DNA (2571bp) protein (857aa)
ABC transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B84F8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21641.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC transporter rbh
SCNpilot_cont_750_bf_scaffold_571_6
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6728..7447)
DNA (720bp) protein (240aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC:1.1.1.-); K00100 [EC:1.1.1.-] rbh
oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A2143 rbh
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:CDO09674.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
SCNpilot_cont_750_bf_scaffold_571_7

Not on your lists

comp(7506..8669)
DNA (1164bp) protein (388aa)
ribose ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346FE99 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21639.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC-type sugar transporter periplasmic component-like protein rbh
SCNpilot_cont_750_bf_scaffold_571_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8886..9809
DNA (924bp) protein (308aa)
Acetyl-hydrolase {ECO:0000313|EMBL:ELQ89431.1}; EC=3.1.1.- {ECO:0000313|EMBL:ELQ89431.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
lipR; caprolactone hydrolase (EC:3.1.1.6) rbh
esterase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469765 rbh
SCNpilot_cont_750_bf_scaffold_571_9
unknown

Not on your lists

comp(10176..10511)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_571_10
unknown

Not on your lists

comp(10542..10799)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_571_11
unknown

Not on your lists

comp(10842..11213)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_571_12

Not on your lists

11513..12232
DNA (720bp) protein (240aa)
3-beta-hydroxysteroid dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B9602 rbh
3-beta-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KGA21636.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_571_13
unknown

Not on your lists

comp(12286..12474)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_571_14
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12534..13016)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FE692A
Uncharacterized protein {ECO:0000313|EMBL:EZP28382.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_cont_750_bf_scaffold_571_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13023..13784
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368C739
Sensor histidine kinase {ECO:0000313|EMBL:KHK97861.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_571_16
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13874..14293)
DNA (420bp) protein (140aa)
endoribonuclease L-PSP n=1 Tax=Agromyces subbeticus RepID=UPI0003B4E53D
Endoribonuclease L-PSP {ECO:0000313|EMBL:GAD35695.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
endoribonuclease L-PSP; K07567 TdcF protein
SCNpilot_cont_750_bf_scaffold_571_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14421..15941
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1J9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY42812.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
carbohydrate kinase
SCNpilot_cont_750_bf_scaffold_571_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15938..17326
DNA (1389bp) protein (463aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00008909};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW01_9FIRM rbh
L-arabinose isomerase rbh
SCNpilot_cont_750_bf_scaffold_571_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

17343..18872
DNA (1530bp) protein (510aa)
lat; L-lysine aminotransferase (EC:2.6.1.36); K03918 L-lysine 6-transaminase [EC:2.6.1.36]
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKZ4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY42808.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SCNpilot_cont_750_bf_scaffold_571_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

18869..20650
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKX5_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY42788.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SCNpilot_cont_750_bf_scaffold_571_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

20678..21514
DNA (837bp) protein (279aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI49_THET1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ACZ43420.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_750_bf_scaffold_571_22
unknown

Not on your lists

21538..22014
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_571_23
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22044..23168)
DNA (1125bp) protein (375aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000366783C
N-acetylglucosamine-6-phosphate deacetylase
SCNpilot_cont_750_bf_scaffold_571_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23161..24012)
DNA (852bp) protein (284aa)
Putative fructose-bisphosphate aldolase {ECO:0000313|EMBL:KJL32042.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KJL32042.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
agaY; tagatose-bisphosphate aldolase; K01636 [EC:4.1.2.-]
Tagatose-bisphosphate aldolase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AD90_LEIXX
SCNpilot_cont_750_bf_scaffold_571_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24000..24920)
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:KJL25214.1}; EC=2.7.1.144 {ECO:0000313|EMBL:KJL25214.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459E2E
PfkB domain-containing protein
SCNpilot_cont_750_bf_scaffold_571_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24917..25888)
DNA (972bp) protein (324aa)
glucokinase n=1 Tax=Agromyces subbeticus RepID=UPI0003B5B28F
sugar kinase
Uncharacterized protein {ECO:0000313|EMBL:AGW40781.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_571_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25885..26799)
DNA (915bp) protein (305aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000313|EMBL:KJL32039.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KJL32039.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sugar isomerase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3AC52 rbh
SIS (sugar ISomerase) domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_571_28
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27042..27830)
DNA (789bp) protein (263aa)
alkaline phosphatase n=1 Tax=Microbacteriaceae RepID=UPI00036602D5
DeoR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGW40779.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_750_bf_scaffold_571_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27940..29124)
DNA (1185bp) protein (395aa)
Putative oxidoreductase YteT {ECO:0000313|EMBL:KJL25507.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL25507.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Oxidoreductase domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PPH7_KRIFD
oxidoreductase domain-containing protein
SCNpilot_cont_750_bf_scaffold_571_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29121..30905)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67556.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Displaying items 1-30 of 45 in total

View Taxonomy