ggKbase home page

SCNpilot_cont_750_bf_scaffold_2969

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2969_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(159..1178)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031F5503 rbh
Transcriptional regulator {ECO:0000313|EMBL:KHK98784.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_2969_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1245..2102
DNA (858bp) protein (286aa)
UDP-glucose 4-epimerase n=1 Tax=Microbacterium yannicii RepID=UPI0002F8C75B rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89237.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
galE; nucleoside-diphosphate-sugar epimerase rbh
SCNpilot_cont_750_bf_scaffold_2969_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2115..3041)
DNA (927bp) protein (309aa)
IMP dehydrogenase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028934F7
Putative dehydrogenase {ECO:0000313|EMBL:EAR24909.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_750_bf_scaffold_2969_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3806..4660
DNA (855bp) protein (285aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAU1_MICTS
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:KHK96449.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2969_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4711..5076
DNA (366bp) protein (122aa)
DoxX family protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGI3_CELFN
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ADG73166.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_750_bf_scaffold_2969_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5092..5781)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI0003659443
Uncharacterized protein {ECO:0000313|EMBL:KHK98652.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2969_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5783..6115)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DC43E6
ATP-dependent DNA ligase {ECO:0000313|EMBL:KEP75576.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ATP-dependent DNA ligase
SCNpilot_cont_750_bf_scaffold_2969_8
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6287..6631
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8Y7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EYT59141.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2969_9
unknown

Not on your lists

comp(6644..6892)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2969_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7122..7487
DNA (366bp) protein (122aa)
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=2 Tax=Microbacterium RepID=H8E3L4_9MICO
von Willebrand factor A {ECO:0000313|EMBL:KIC59116.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
SCNpilot_cont_750_bf_scaffold_2969_11
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7519..7842)
DNA (324bp) protein (108aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEI1_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP72677.1}; Flags: Fragment;; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_2969_12
unknown

Not on your lists

8443..8643
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F75FD9
SCNpilot_cont_750_bf_scaffold_2969_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8706..9404
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037CE400
Uncharacterized protein {ECO:0000313|EMBL:EYT52499.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2969_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9511..13944)
DNA (4434bp) protein (1478aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B7B2D9
Cna protein B-type domain protein {ECO:0000313|EMBL:KJL24290.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2969_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14116..15576)
DNA (1461bp) protein (487aa)
MFS transporter n=1 Tax=Humibacter albus RepID=UPI0003B34308 rbh
MFS transporter {ECO:0000313|EMBL:KHK95691.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
major facilitator superfamily protein
SCNpilot_cont_750_bf_scaffold_2969_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15878..16051
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030EB19B
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) (Modular protein) {ECO:0000313|EMBL:CDK01817.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_750_bf_scaffold_2969_17
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16064..16672)
DNA (609bp) protein (203aa)
LysR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B4B5C7
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI11077.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_750_bf_scaffold_2969_18
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16945..17832
DNA (888bp) protein (296aa)
Aldo/keto reductase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6L6_CELGA
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEI11076.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_750_bf_scaffold_2969_19
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17862..18797
DNA (936bp) protein (312aa)
Aldo/keto reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6Y0_NAKMY rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ACV80878.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_750_bf_scaffold_2969_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18851..19690
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036385EA
1,4-dihydroxy-2-naphthoate prenyltransferase {ECO:0000313|EMBL:KHK96614.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative membrane polyprenyltransferase
SCNpilot_cont_750_bf_scaffold_2969_21
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19668..20726)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035D1AC7 rbh
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:EYT56352.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
2-polyprenyl-6-methoxyphenol hydroxylase
Displaying 21 items

View Taxonomy