ggKbase home page

SCNpilot_cont_750_bf_scaffold_1603

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1603_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2060
DNA (2058bp) protein (686aa)
Protein translocase subunit SecA 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SECA1_NITHX
azi, div; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Protein translocase subunit SecA 1 {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2189..3709)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQX1_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61376.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3934..4884)
DNA (951bp) protein (317aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000255|HAMAP-Rule:MF_00823};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ACCA_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1603_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5359..6318)
DNA (960bp) protein (320aa)
Tyrosine recombinase XerD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW9_NITHX
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6436..6582)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61379.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7089..7691
DNA (603bp) protein (201aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Shikimate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW7_NITHX
SCNpilot_cont_750_bf_scaffold_1603_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7754..8905
DNA (1152bp) protein (384aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-dehydroquinate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=AROB_NITHX
SCNpilot_cont_750_bf_scaffold_1603_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9033..10385
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61382.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10603..10923)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVM6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03665.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_1603_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10927..12060)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37560.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1603_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12449..12745)
DNA (297bp) protein (99aa)
Transcriptional regulator, BolA protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW2_NITHX
BolA-like protein; K05527 BolA protein
Transcriptional regulator, BolA protein family {ECO:0000313|EMBL:ABE61385.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12828..13493
DNA (666bp) protein (222aa)
Heat shock protein DnaJ-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW1_NITHX
heat shock protein DnaJ-like
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:ABE61386.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13519..13830)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR30_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37556.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1603_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..14512)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369A354
Membrane protein {ECO:0000313|EMBL:KJC60473.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_1603_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14816..15814
DNA (999bp) protein (333aa)
cobalt chelatase small subunit (EC:6.6.1.2); K09882 cobaltochelatase CobS [EC:6.6.1.2]
Cobalt chelatase, pCobS small subunit n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR34_9BRAD
Cobalt chelatase, pCobS small subunit {ECO:0000313|EMBL:EAQ37555.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_750_bf_scaffold_1603_16
unknown

Not on your lists

comp(15754..16095)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1603_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16860..17678
DNA (819bp) protein (273aa)
cobalt chelatase large subunit (EC:6.6.1.2); K09883 cobaltochelatase CobT [EC:6.6.1.2]
Cobaltochelatase CobT subunit {ECO:0000313|EMBL:ABE61389.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABE61389.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Cobaltochelatase CobT subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV8_NITHX
SCNpilot_cont_750_bf_scaffold_1603_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17868..18899
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61390.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18957..19250)
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL28_NITHX
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19820..20599
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR35_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37550.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1603_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20968..22131)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Brucella suis F8/06-1 RepID=N8JY23_BRUSS
Uncharacterized protein {ECO:0000313|EMBL:CDP51774.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_cont_750_bf_scaffold_1603_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22333..24273
DNA (1941bp) protein (647aa)
Helicase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV3_NITHX
helicase-like protein
Helicase-like protein {ECO:0000313|EMBL:ABE61394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24313..24600
DNA (288bp) protein (96aa)
RNA-binding S4 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR42_9BRAD
RNA-binding S4 {ECO:0000313|EMBL:EAQ37548.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
RNA-binding S4
SCNpilot_cont_750_bf_scaffold_1603_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24688..25026
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQV1_NITHX
4Fe-4S ferredoxin; K05524 ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABE61396.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25440..26270
DNA (831bp) protein (277aa)
Transcriptional regulator, CarD family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVL2_NITWN
transcription factor CarD; K07736 CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ABA03679.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_1603_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26610..28103)
DNA (1494bp) protein (498aa)
Peptidase M48, Ste24p n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU9_NITHX rbh
peptidase M48, Ste24p rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABE61398.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28686..29468)
DNA (783bp) protein (261aa)
Nuclease (SNase-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU8_NITHX
nuclease (SNase-like)
Nuclease (SNase-like) {ECO:0000313|EMBL:ABE61399.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29554..29832)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2N8_RHOP2
Membrane protein {ECO:0000313|EMBL:KIZ47686.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1603_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29922..30515)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQU6_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61401.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1603_30
unknown

Not on your lists

31226..31330
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

View Taxonomy