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SCNpilot_cont_750_bf_scaffold_1736

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1736_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(642..947)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHN9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28581.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_750_bf_scaffold_1736_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1450..3339)
DNA (1890bp) protein (630aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] rbh
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphorylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB5_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1736_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3969..6815)
DNA (2847bp) protein (949aa)
malto-oligosyltrehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] rbh
Maltooligosyl trehalose synthase {ECO:0000313|EMBL:ABE62283.1}; EC=5.4.99.15 {ECO:0000313|EMBL:ABE62283.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Maltooligosyl trehalose synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB4_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1736_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6815..8575)
DNA (1761bp) protein (587aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB3_NITHX
malto-oligosyltrehalose trehalohydrolase
SCNpilot_cont_750_bf_scaffold_1736_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8572..10590)
DNA (2019bp) protein (673aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glycogen debranching enzyme GlgX n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB2_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1736_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10587..12737)
DNA (2151bp) protein (717aa)
glycogen branching protein (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB {ECO:0000255|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000255|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000255|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000255|HAMAP-Rule:MF_00685}; Short=BE {ECO:0000255|HAMAP-Rule:MF_00685};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLGB_NITHX
SCNpilot_cont_750_bf_scaffold_1736_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12753..16019)
DNA (3267bp) protein (1089aa)
trehalose synthase-like protein; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16]
Trehalose synthase {ECO:0000313|EMBL:ABE62287.1}; EC=5.4.99.16 {ECO:0000313|EMBL:ABE62287.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Trehalose synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNB0_NITHX
SCNpilot_cont_750_bf_scaffold_1736_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16028..18001)
DNA (1974bp) protein (658aa)
alpha amylase; K01176 alpha-amylase [EC:3.2.1.1]
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNA9_NITHX
SCNpilot_cont_750_bf_scaffold_1736_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..20168
DNA (2013bp) protein (671aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
4-alpha-glucanotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNA8_NITHX
SCNpilot_cont_750_bf_scaffold_1736_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20445..20978)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUS2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36141.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1736_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21297..22361)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C69CA rbh
patatin; K07001 NTE family protein rbh
Patatin {ECO:0000313|EMBL:ADH87487.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_1736_12
unknown

Not on your lists

comp(22594..22686)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1736_13
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23164..24075
DNA (912bp) protein (304aa)
hydrolase; K01561 haloacetate dehalogenase [EC:3.8.1.3]
Putative hydrolase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZY8_9BRAD
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC45136.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_750_bf_scaffold_1736_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24059..24505)
DNA (447bp) protein (149aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA-adenosine deaminase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIP0_NITHX
zinc-binding CMP/dCMP deaminase
SCNpilot_cont_750_bf_scaffold_1736_15
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24638..26638
DNA (2001bp) protein (667aa)
pseudouridine synthase (EC:4.2.1.70); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Pseudouridine synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPI8_NITWN rbh
SCNpilot_cont_750_bf_scaffold_1736_16
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26641..27195
DNA (555bp) protein (185aa)
Putative methyltransferase {ECO:0000313|EMBL:CCD99762.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCD99762.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Putative methyltransferase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZY5_9BRAD
methyltransferase
SCNpilot_cont_750_bf_scaffold_1736_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27367..27675)
DNA (309bp) protein (103aa)
RNA polymerase sigma factor RpoH n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJG9_NITHX
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 17 items

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