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SCNpilot_cont_750_bf_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_542_1
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

323..988
DNA (666bp) protein (222aa)
Putative TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. CF149 RepID=S6HVG7_9PSED
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:EPJ92812.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_542_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..2070
DNA (1086bp) protein (362aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] rbh
cysteine synthase n=1 Tax=Rhizobium loti RepID=UPI000367EE7C rbh
Cysteine synthase A {ECO:0000313|EMBL:AID33586.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_750_bf_scaffold_542_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2065..2946)
DNA (882bp) protein (294aa)
carbonate dehydratase (EC:4.2.1.1) rbh
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KL33_METEX rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EHP91776.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
SCNpilot_cont_750_bf_scaffold_542_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3093..4199
DNA (1107bp) protein (369aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KQA3_METC4 rbh
NADH:flavin oxidoreductase/NADH oxidase rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACK82139.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_cont_750_bf_scaffold_542_5
unknown

Not on your lists

4240..4467
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_542_6
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4674..6002
DNA (1329bp) protein (443aa)
CoA-disulfide reductase n=1 Tax=Burkholderia terrae BS001 RepID=I5CX77_9BURK rbh
CoA-disulfide reductase {ECO:0000313|EMBL:EIN00496.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
CoA-disulfide reductase
SCNpilot_cont_750_bf_scaffold_542_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6005..6304
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXX6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23861.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_542_8
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6361..6849
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CB15_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIM93083.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_542_9
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7022..8404
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CX74_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIN00493.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_542_10
unknown

Not on your lists

8405..9223
DNA (819bp) protein (273aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_542_11
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9218..10471)
DNA (1254bp) protein (418aa)
Group 1 glycosyl transferase n=1 Tax=Burkholderia terrae BS001 RepID=I5CX68_9BURK rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIN00487.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
group 1 glycosyl transferase
SCNpilot_cont_750_bf_scaffold_542_12
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10500..12044)
DNA (1545bp) protein (515aa)
Protein FdrA n=1 Tax=Burkholderia terrae BS001 RepID=I5CX69_9BURK
Protein FdrA {ECO:0000313|EMBL:EIN00488.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
protein FdrA
SCNpilot_cont_750_bf_scaffold_542_13
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12268..12891
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CX70_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIN00489.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCNpilot_cont_750_bf_scaffold_542_14
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13038..13697
DNA (660bp) protein (220aa)
Cupin n=1 Tax=Burkholderia terrae BS001 RepID=I5CX84_9BURK
Cupin {ECO:0000313|EMBL:EIN00503.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
cupin
SCNpilot_cont_750_bf_scaffold_542_15
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13886..15406)
DNA (1521bp) protein (507aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase n=1 Tax=Burkholderia terrae BS001 RepID=I5CX83_9BURK rbh
Argininosuccinate lyase {ECO:0000313|EMBL:EIN00502.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCNpilot_cont_750_bf_scaffold_542_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15403..16419)
DNA (1017bp) protein (339aa)
1-aminocyclopropane-1-carboxylate deaminase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15]
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:AEA23858.1}; EC=3.5.99.7 {ECO:0000313|EMBL:AEA23858.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV6_PSEUX
SCNpilot_cont_750_bf_scaffold_542_17
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16416..17759)
DNA (1344bp) protein (448aa)
Fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
Fumarate lyase n=1 Tax=Burkholderia terrae BS001 RepID=I5CX81_9BURK rbh
Fumarate lyase {ECO:0000313|EMBL:EIN00500.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCNpilot_cont_750_bf_scaffold_542_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17744..18658)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23856.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_542_19
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18645..19451)
DNA (807bp) protein (269aa)
phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19]
Phosphosulfolactate synthase n=1 Tax=Burkholderia terrae BS001 RepID=I5CX79_9BURK
Phosphosulfolactate synthase {ECO:0000313|EMBL:EIN00498.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCNpilot_cont_750_bf_scaffold_542_20
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19772..20182)
DNA (411bp) protein (137aa)
OsmC family protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CX75_9BURK
OsmC family protein {ECO:0000313|EMBL:EIN00494.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
OsmC family protein
SCNpilot_cont_750_bf_scaffold_542_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20255..21652)
DNA (1398bp) protein (466aa)
GntR family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI00036C77CB
DeoR family transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AFK56808.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_542_22
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..23006
DNA (1008bp) protein (336aa)
hypothetical protein; K01502 aliphatic nitrilase [EC:3.5.5.7] rbh
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFR2_BRAJP rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL08276.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_542_23
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22996..24093
DNA (1098bp) protein (366aa)
Radical SAM protein, MSMEG_0568 family n=1 Tax=Rhizobium sp. AP16 RepID=J2WYD6_9RHIZ rbh
Radical SAM protein, MSMEG_0568 family {ECO:0000313|EMBL:EJK87365.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
radical SAM protein rbh
SCNpilot_cont_750_bf_scaffold_542_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24090..24635
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFR4_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08278.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_542_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24635..25633
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFR5_BRAJP rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY53551.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein; K07123 rbh
SCNpilot_cont_750_bf_scaffold_542_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25630..26682
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAX3_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH90990.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_542_27
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27599..28507)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XKD8_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ERI15380.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_542_28
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28840..29826
DNA (987bp) protein (329aa)
Oxidoreductase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YXG9_9RHIZ rbh
Oxidoreductase {ECO:0000313|EMBL:ERI15381.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_542_29
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29983..31155
DNA (1173bp) protein (391aa)
Aldo/keto reductase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XLE7_9RHIZ rbh
Aldo/keto reductase {ECO:0000313|EMBL:ERI15383.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
aldo/keto reductase rbh
SCNpilot_cont_750_bf_scaffold_542_30
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31245..31433
DNA (189bp) protein (63aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X3J9_9RHIZ
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ERI15384.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
Displaying items 1-30 of 35 in total

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