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SCNpilot_cont_750_bf_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_545_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..238)
DNA (237bp) protein (79aa)
hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase Nham_3637 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PKHD-type hydroxylase Nham_3637 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y3637_NITHX
SCNpilot_cont_750_bf_scaffold_545_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322..2829)
DNA (2508bp) protein (836aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD1_NITHX
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABE64366.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3207..4250
DNA (1044bp) protein (348aa)
Outer membrane transport energization protein ExbB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD0_NITHX rbh
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:ABE64367.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4256..4708
DNA (453bp) protein (151aa)
Outer membrane transport energization protein ExbD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC9_NITHX
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:ABE64368.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4705..5397
DNA (693bp) protein (231aa)
Outer membrane transport energization protein TonB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC8_NITHX
TonB-like; K03832 periplasmic protein TonB
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABE64369.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5394..7805
DNA (2412bp) protein (804aa)
Protein translocase subunit SecA 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SECA2_NITHX rbh
SecA DEAD-like protein rbh
Protein translocase subunit SecA 2 {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8112..9332
DNA (1221bp) protein (407aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC4_NITHX
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE64373.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10454
DNA (864bp) protein (288aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC3_NITHX rbh
inner-membrane translocator rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE64374.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10451..11398
DNA (948bp) protein (316aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC2_NITHX rbh
inner-membrane translocator rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE64375.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..12783
DNA (1389bp) protein (463aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC0_NITHX
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE64377.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12868..14400)
DNA (1533bp) protein (511aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSH0_9BRAD
SCNpilot_cont_750_bf_scaffold_545_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14432..14689
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida S11 RepID=J8V3X8_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EJT84489.1}; TaxID=1218169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S11.;"
SCNpilot_cont_750_bf_scaffold_545_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14797..15063)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSG8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37036.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_545_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15159..15509)
DNA (351bp) protein (117aa)
Heat shock protein Hsp20 n=2 Tax=Nitrobacter RepID=Q3SW62_NITWN
heat shock protein Hsp20
Heat shock protein {ECO:0000313|EMBL:EAQ37037.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_750_bf_scaffold_545_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15823..16605)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347936F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD07478.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_545_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16970..17389)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSG5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37038.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_545_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17480..18826
DNA (1347bp) protein (449aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=AROA_NITHX
SCNpilot_cont_750_bf_scaffold_545_18
unknown

Not on your lists

comp(18688..19029)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_545_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19100..19414
DNA (315bp) protein (105aa)
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CMP kinase {ECO:0000255|HAMAP-Rule:MF_00238};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Cytidylate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=KCY_NITHX
SCNpilot_cont_750_bf_scaffold_545_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19452..20165
DNA (714bp) protein (238aa)
Methyltransferase FkbM n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSG3_9BRAD rbh
methyltransferase FkbM rbh
Methyltransferase FkbM {ECO:0000313|EMBL:EAQ37041.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_750_bf_scaffold_545_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20303..21463)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEC2_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57140.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_545_22
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21521..21724)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K5I7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA07376.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_cont_750_bf_scaffold_545_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21996..22127
DNA (132bp) protein (44aa)
30S ribosomal protein S1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRT3_NITHX
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_545_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22303..23373)
DNA (1071bp) protein (357aa)
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA-dihydrouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHB9_NITHX rbh
SCNpilot_cont_750_bf_scaffold_545_25
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23481..24671
DNA (1191bp) protein (397aa)
Chorismate mutase n=1 Tax=Pseudomonas syringae pv. actinidiae ICMP 19073 RepID=S6LGA1_PSESF rbh
Chorismate mutase family protein {ECO:0000313|EMBL:AHZ72609.1}; TaxID=1147786 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii JR-1.;"
chorismate mutase rbh
SCNpilot_cont_750_bf_scaffold_545_26
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25217..28162
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C63CB
hypothetical protein rbh
Bll2701 protein {ECO:0000313|EMBL:BAC47966.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_bf_scaffold_545_27
unknown

Not on your lists

28176..29051
DNA (876bp) protein (292aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_545_28
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29072..29728
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KGT77116.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_750_bf_scaffold_545_29
unknown

Not on your lists

comp(29855..30355)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_545_30
unknown

Not on your lists

comp(30418..31812)
DNA (1395bp) protein (465aa)

This feature has no annotations

Displaying items 1-30 of 90 in total

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