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SCNpilot_cont_750_bf_scaffold_755

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_755_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1213)
DNA (1212bp) protein (404aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
peptidase M41, FtsH (EC:3.6.4.6); K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTS0_9BRAD
SCNpilot_cont_750_bf_scaffold_755_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1602..2126)
DNA (525bp) protein (175aa)
tRNA(Ile)-lysidine synthetase-like protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHR1_NITHX
SCNpilot_cont_750_bf_scaffold_755_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2102..2560)
DNA (459bp) protein (153aa)
tRNA(Ile)-lysidine synthase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SP27_NITWN
SCNpilot_cont_750_bf_scaffold_755_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2710..3666)
DNA (957bp) protein (319aa)
TPR repeat protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHR0_NITHX
TPR repeat-containing protein
TPR repeat protein {ECO:0000313|EMBL:ABE64237.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_755_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4280..4981
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P911_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37269.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
high-affinity nickel-transporter rbh
SCNpilot_cont_750_bf_scaffold_755_6
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5003..6697)
DNA (1695bp) protein (565aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003707913 rbh
hypothetical protein rbh
Membrane protein {ECO:0000313|EMBL:KJC48274.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_750_bf_scaffold_755_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..7978
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360B390
Uncharacterized protein {ECO:0000313|EMBL:EIG61863.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_755_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8024..8581
DNA (558bp) protein (186aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV45_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM27837.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_755_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8880..9512)
DNA (633bp) protein (211aa)
Urease accessory protein UreG n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYN4_AFIFE rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_cont_750_bf_scaffold_755_10
unknown

Not on your lists

comp(9534..9641)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_755_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9742..10128
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS65_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31279.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_750_bf_scaffold_755_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10572..11333
DNA (762bp) protein (254aa)
Urease accessory protein UreD n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV32_AFIFE rbh
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
urease accessory protein UreD; K03190 urease accessory protein rbh
SCNpilot_cont_750_bf_scaffold_755_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11361..11663
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
urease subunit gamma; K01430 urease subunit gamma [EC:3.5.1.5]
Urease subunit gamma n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ91_AFIFE
SCNpilot_cont_750_bf_scaffold_755_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11674..11979
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
urease subunit beta; K01429 urease subunit beta [EC:3.5.1.5]
Urease subunit beta n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLU3_AFIFE
SCNpilot_cont_750_bf_scaffold_755_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..13692
DNA (1704bp) protein (568aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] rbh
Urease subunit alpha n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYN6_AFIFE rbh
SCNpilot_cont_750_bf_scaffold_755_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13749..14792
DNA (1044bp) protein (348aa)
Urea transporter n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS68_AFIFE rbh
Urea transporter {ECO:0000313|EMBL:EKS31284.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Urea transporter; K08717 urea transporter rbh
SCNpilot_cont_750_bf_scaffold_755_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14799..15482)
DNA (684bp) protein (228aa)
Urease accessory protein UreF n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV35_AFIFE rbh
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
urease accessory protein UreF; K03188 urease accessory protein
SCNpilot_cont_750_bf_scaffold_755_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15734..17185)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ96_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31286.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
citrate transporter rbh
SCNpilot_cont_750_bf_scaffold_755_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18113..20122
DNA (2010bp) protein (670aa)
Nickel/cobalt-specific TonB-dependent outer membrane receptor n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGE4_9BRAD rbh
Nickel/cobalt-specific TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EGP09808.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
TonB-dependent receptor rbh
SCNpilot_cont_750_bf_scaffold_755_20
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20417..23482)
DNA (3066bp) protein (1022aa)
RND efflux transporter, translocase subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JI82_HYPSM rbh
RND efflux transporter, translocase subunit rbh
RND efflux transporter, translocase subunit {ECO:0000313|EMBL:CCB64497.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_bf_scaffold_755_21
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23479..24594)
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELM3_METSB rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACK50017.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_750_bf_scaffold_755_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24858..25385)
DNA (528bp) protein (176aa)
Putative cation-transporting P-type ATPase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1W5_9BRAD
Putative cation-transporting P-type ATPase {ECO:0000313|EMBL:EAQ33777.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ATPase P
SCNpilot_cont_750_bf_scaffold_755_23
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25388..27586)
DNA (2199bp) protein (733aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Burkholderia sp. H160 RepID=B5WEQ3_9BURK rbh
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:EEA03183.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
ATPase P rbh
SCNpilot_cont_750_bf_scaffold_755_24
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27628..29280)
DNA (1653bp) protein (551aa)
Na+/Picotransporter n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9E9_STAND rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM61342.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Na+/Picotransporter; K03324 phosphate:Na+ symporter rbh
SCNpilot_cont_750_bf_scaffold_755_25
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29295..30212)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WGS6_BURSC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG17671.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCNpilot_cont_750_bf_scaffold_755_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31434..31904
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK05_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28749.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_755_27
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32109..33107)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036C0BBF rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHR01865.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_755_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33733..34443
DNA (711bp) protein (237aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR90_NITHX
Carbonic anhydrase {ECO:0000313|EMBL:ABE61257.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_755_29
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34503..36113)
DNA (1611bp) protein (537aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELL3_METSB rbh
NADH/ubiquinone/plastoquinone rbh
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ACK50007.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_750_bf_scaffold_755_30
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36110..37609)
DNA (1500bp) protein (500aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5] rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ACK50006.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACK50006.1};; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
NADH dehydrogenase (Quinone) n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELL2_METSB rbh
Displaying items 1-30 of 38 in total

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