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SCNpilot_cont_750_bf_scaffold_2053

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2053_1
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..466
DNA (465bp) protein (155aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS8_GLUDA
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACI52556.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_2053_2
unknown

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463..570
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2053_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(639..1676)
DNA (1038bp) protein (346aa)
Adenine-specific methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY6_PELHB rbh
adenine-specific methyltransferase rbh
Adenine-specific methyltransferase {ECO:0000313|EMBL:AEQ52769.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_bf_scaffold_2053_4
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1786..3483)
DNA (1698bp) protein (566aa)
Resolvase domain n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZJJ4_GLUDA rbh
Resolvase {ECO:0000313|EMBL:KGJ19646.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
Resolvase domain rbh
SCNpilot_cont_750_bf_scaffold_2053_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3497..3877)
DNA (381bp) protein (127aa)
XRE family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1S9_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EYR78513.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator helix turn helix domain
SCNpilot_cont_750_bf_scaffold_2053_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3867..4190)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EY56_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78514.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2053_7
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4648..4878
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=K0P5Z9_RHIML
Uncharacterized protein {ECO:0000313|EMBL:GAJ29127.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2053_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5222..5893
DNA (672bp) protein (224aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
DNA-methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0HUC0_9SPHN
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_cont_750_bf_scaffold_2053_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6785..7105
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036E6369
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42459.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_bf_scaffold_2053_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7325..7708)
DNA (384bp) protein (128aa)
PilT protein domain-containing protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0WHJ4_9RHIZ
PilT protein domain-containing protein {ECO:0000313|EMBL:EJZ22719.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein; K07062
SCNpilot_cont_750_bf_scaffold_2053_11
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7705..7905)
DNA (201bp) protein (67aa)
antitoxin n=1 Tax=Rhizobium leguminosarum RepID=UPI00036CA2D7
vapB; Antitoxin VapB32 (modular protein)
Antitoxin VapB32 (Modular protein) {ECO:0000313|EMBL:CDI12376.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_cont_750_bf_scaffold_2053_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8372..8758)
DNA (387bp) protein (129aa)
Transposase, IS4 family n=2 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3STW4_NITWN
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:ABA04277.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_2053_13
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9268..9789
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D52D8
Uncharacterized protein {ECO:0000313|EMBL:KHJ54571.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2053_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..10110)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W869_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY79928.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying 14 items

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