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SCNpilot_cont_750_bf_scaffold_4126

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4126_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102..1352
DNA (1251bp) protein (417aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_00296}; EC=2.3.1.31 {ECO:0000255|HAMAP-Rule:MF_00296};; Homoserine O-trans-acetylase {ECO:0000255|HAMAP-Rule:MF_00296}; Short=HTA {ECO:0000255|HAMAP-Rule:MF_00296};; Short=Homoserine transacetylase {ECO:0000255|HAMAP-Rule:MF_00296};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Homoserine O-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=METX_NITHX rbh
SCNpilot_cont_750_bf_scaffold_4126_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..1944
DNA (591bp) protein (197aa)
Methionine biosynthesis MetW n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQD2_NITHX
methionine biosynthesis MetW
Methionine biosynthesis MetW {ECO:0000313|EMBL:ABE61565.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2546..2893
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQD1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61566.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2910..3695)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQD0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61567.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3928..6474
DNA (2547bp) protein (849aa)
ATPase AAA-2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC9_NITHX
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
ATPase
SCNpilot_cont_750_bf_scaffold_4126_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6878..8716
DNA (1839bp) protein (613aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
sulfite reductase (NADPH) flavoprotein, alpha chain (EC:1.14.13.39); K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] rbh
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SV34_NITWN rbh
SCNpilot_cont_750_bf_scaffold_4126_7
unknown

Not on your lists

comp(8976..9287)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4126_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9340..10401
DNA (1062bp) protein (354aa)
sulfite reductase subunit beta (EC:1.8.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000255|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000255|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000255|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000255|HAMAP-Rule:MF_01540};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=CYSI_NITWN
SCNpilot_cont_750_bf_scaffold_4126_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10522..11706
DNA (1185bp) protein (395aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cystathionine gamma-synthase {ECO:0000313|EMBL:ABE61571.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ABE61571.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Cystathionine gamma-synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC6_NITHX
SCNpilot_cont_750_bf_scaffold_4126_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11829..12209)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61572.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12422..13531)
DNA (1110bp) protein (370aa)
exodeoxyribonuclease V; K01144 exodeoxyribonuclease V [EC:3.1.11.5] rbh
Exodeoxyribonuclease V n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC4_NITHX rbh
Exodeoxyribonuclease V {ECO:0000313|EMBL:ABE61573.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14168..15115)
DNA (948bp) protein (316aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC3_NITHX
two component, sigma54 specific, Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABE61574.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_13
unknown

Not on your lists

15210..15617
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4126_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15518..15868)
DNA (351bp) protein (117aa)
Surface presentation of antigens (SPOA) protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SV28_NITWN
flagellar motor switch protein; K02417 flagellar motor switch protein FliN/FliY
Surface presentation of antigens (SPOA) protein {ECO:0000313|EMBL:ABA03863.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_4126_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15885..16511)
DNA (627bp) protein (209aa)
Flagellar export protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC1_NITHX
fliH; flagellar assembly protein H; K02411 flagellar assembly protein FliH
Flagellar export protein {ECO:0000313|EMBL:ABE61576.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16511..17593)
DNA (1083bp) protein (361aa)
Flagellar motor switch protein FliG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC0_NITHX
fliG; flagellar motor switch protein G; K02410 flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17600..19150)
DNA (1551bp) protein (517aa)
Flagellar M-ring protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQB9_NITHX rbh
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19327..19602)
DNA (276bp) protein (92aa)
Uncharacterized protein n=25 Tax=Bradyrhizobiaceae RepID=A4Z085_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41068.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_4126_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19740..20357)
DNA (618bp) protein (206aa)
Flagellar hook capping protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRR9_9BRAD rbh
Flagellar hook capping protein {ECO:0000313|EMBL:EAQ37324.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD rbh
SCNpilot_cont_750_bf_scaffold_4126_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20367..21896)
DNA (1530bp) protein (510aa)
Flagellar hook-length control protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQB6_NITHX
flagellar hook-length control protein
Flagellar hook-length control protein {ECO:0000313|EMBL:ABE61581.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4126_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22235..22333
DNA (99bp) protein (33aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRR7_9BRAD
Displaying 21 items

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