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SCNpilot_cont_750_bf_scaffold_3625

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3625_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(390..1916)
DNA (1527bp) protein (509aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ABE63210.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ABE63210.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKN7_NITHX
SCNpilot_cont_750_bf_scaffold_3625_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2550..2888
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKN8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63209.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2962..4170)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKN9_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63208.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_4
unknown

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comp(4552..4800)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3625_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4862..5194
DNA (333bp) protein (111aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKP0_NITHX
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5479..6117
DNA (639bp) protein (213aa)
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:ABJ07336.1}; EC=3.4.21.92 {ECO:0000313|EMBL:ABJ07336.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07L48_RHOP5
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
SCNpilot_cont_750_bf_scaffold_3625_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6158..7768
DNA (1611bp) protein (537aa)
AAA ATPase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRY5_NITWN
ATPase AAA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
AAA ATPase {ECO:0000313|EMBL:ABA04956.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_3625_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8196..8804)
DNA (609bp) protein (203aa)
50S ribosomal protein L9 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL9_NITHX rbh
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 rbh
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8847..9833)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKP3_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63204.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10078..10212)
DNA (135bp) protein (45aa)
30S ribosomal protein S18 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ44_9BRAD
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_750_bf_scaffold_3625_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10253..10690)
DNA (438bp) protein (146aa)
30S ribosomal protein S6 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RS6_NITHX
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000255|HAMAP-Rule:MF_00360}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11048..12001
DNA (954bp) protein (318aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5Y9_9BRAD rbh
SCNpilot_cont_750_bf_scaffold_3625_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12557..13294
DNA (738bp) protein (246aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABE63145.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABE63145.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV2_NITHX
SCNpilot_cont_750_bf_scaffold_3625_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13571..13810
DNA (240bp) protein (80aa)
Acyl carrier protein n=6 Tax=Bradyrhizobiaceae RepID=ACP_BRASB
acpP; acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000255|HAMAP-Rule:MF_01217}; Short=ACP {ECO:0000255|HAMAP-Rule:MF_01217};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13843..15078
DNA (1236bp) protein (412aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV4_NITHX rbh
SCNpilot_cont_750_bf_scaffold_3625_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15204..16481
DNA (1278bp) protein (426aa)
Aminodeoxychorismate lyase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV5_NITHX
aminodeoxychorismate lyase; K07082 UPF0755 protein
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABE63142.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16611..17498
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63141.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17502..18161
DNA (660bp) protein (220aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Guanylate kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=KGUA_NITHX
SCNpilot_cont_750_bf_scaffold_3625_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18165..19184)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV8_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63139.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3625_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19359..19844)
DNA (486bp) protein (162aa)
zinc-binding alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKV9_NITHX
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABE63138.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 20 items

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