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SCNpilot_cont_750_bf_scaffold_1251

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1251_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..216)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62624.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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743..1627
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMC2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62625.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1833..3590
DNA (1758bp) protein (586aa)
Methyl-accepting chemotaxis protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YFK2_9BRAD rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EHR01669.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
chemotaxis protein rbh
SCNpilot_cont_750_bf_scaffold_1251_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3663..4337)
DNA (675bp) protein (225aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] rbh
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000255|HAMAP-Rule:MF_00688}; EC=2.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00688};; L/F-transferase {ECO:0000255|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LFTR_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1251_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4422..5510)
DNA (1089bp) protein (363aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:ABE62984.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE62984.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB3_NITHX rbh
signal transduction histidine kinase rbh
SCNpilot_cont_750_bf_scaffold_1251_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5507..5947)
DNA (441bp) protein (147aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB4_NITHX
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABE62983.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5944..7482)
DNA (1539bp) protein (513aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB5_NITHX rbh
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_750_bf_scaffold_1251_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7628..8983)
DNA (1356bp) protein (452aa)
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] rbh
Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000313|EMBL:ABE62981.1}; EC=6.3.4.14 {ECO:0000313|EMBL:ABE62981.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Acetyl-CoA carboxylase carboxyltransferase subunit alpha n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB6_NITHX rbh
SCNpilot_cont_750_bf_scaffold_1251_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9009..9503)
DNA (495bp) protein (165aa)
Biotin carboxyl carrier protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB7_NITHX
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABE62980.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9545..10015)
DNA (471bp) protein (157aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|HAMAP-Rule:MF_00169}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
3-dehydroquinate dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=AROQ_NITHX
SCNpilot_cont_750_bf_scaffold_1251_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10300..11085)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD06_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04344.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1251_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11289..12056)
DNA (768bp) protein (256aa)
DSBA oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLB9_NITHX rbh
DSBA oxidoreductase rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ABE62978.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..13606)
DNA (1287bp) protein (429aa)
Peptidase M48, Ste24p n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC0_NITHX
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABE62977.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_1251_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13844..14956
DNA (1113bp) protein (371aa)
Aminotransferase {ECO:0000313|EMBL:ABE62976.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABE62976.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Aminotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC1_NITHX
class I and II aminotransferase
SCNpilot_cont_750_bf_scaffold_1251_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15830..16573
DNA (744bp) protein (248aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYR6_9BRAD
SCNpilot_cont_750_bf_scaffold_1251_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16588..17157
DNA (570bp) protein (190aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLC2_NITHX
SCNpilot_cont_750_bf_scaffold_1251_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17694..18131)
DNA (438bp) protein (146aa)
ArsR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA9EBA
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50683.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transcriptional regulator
Displaying 17 items

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