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SCNpilot_cont_750_bf_scaffold_832

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_832_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..109)
DNA (108bp) protein (36aa)
FoF1 ATP synthase, subunit I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRH7_NITHX
FoF1 ATP synthase subunit I; K02116 ATP synthase protein I
FoF1 ATP synthase, subunit I {ECO:0000313|EMBL:ABE61170.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_832_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

904..1461
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRH6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61171.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_832_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1761..2435
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRH4_NITHX
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE61173.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_832_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2541..6050)
DNA (3510bp) protein (1170aa)
Periplasmic sensor hybrid histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRH3_NITHX
periplasmic sensor hybrid histidine kinase
Periplasmic sensor hybrid histidine kinase {ECO:0000313|EMBL:ABE61174.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_832_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6268..6918
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SW32_NITWN rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABA03509.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_832_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7030..8175)
DNA (1146bp) protein (382aa)
5-aminolevulinate synthase (EC:2.3.1.37); K00643 5-aminolevulinate synthase [EC:2.3.1.37]
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
5-aminolevulinate synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SW31_NITWN
SCNpilot_cont_750_bf_scaffold_832_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8447..9400)
DNA (954bp) protein (318aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6]
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Biotin synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=BIOB_NITHX
SCNpilot_cont_750_bf_scaffold_832_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9604..10269)
DNA (666bp) protein (222aa)
Possible outer membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT00_9BRAD rbh
Possible outer membrane protein {ECO:0000313|EMBL:EAQ36854.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
outer membrane protein rbh
SCNpilot_cont_750_bf_scaffold_832_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11109..12398
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00111}; EC=2.5.1.7 {ECO:0000255|HAMAP-Rule:MF_00111};; Enoylpyruvate transferase {ECO:0000255|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000255|HAMAP-Rule:MF_00111}; Short=EPT {ECO:0000255|HAMAP-Rule:MF_00111};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MURA_NITHX rbh
SCNpilot_cont_750_bf_scaffold_832_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12712..13329
DNA (618bp) protein (206aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT01_9BRAD
SCNpilot_cont_750_bf_scaffold_832_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13302..13922
DNA (621bp) protein (207aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT01_9BRAD
SCNpilot_cont_750_bf_scaffold_832_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14192..14686
DNA (495bp) protein (165aa)
UPF0262 protein NB311A_06868 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT05_9BRAD rbh
UPF0262 protein NB311A_06868 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_832_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14780..15247
DNA (468bp) protein (156aa)
Protein tyrosine phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRG1_NITHX
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABE61186.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_832_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15559..17883
DNA (2325bp) protein (775aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D7AEF
TonB-denpendent receptor {ECO:0000313|EMBL:ETR78576.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ferrichrome-iron receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_bf_scaffold_832_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17892..19049
DNA (1158bp) protein (386aa)
peptidase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B793D rbh
Bradyrhizobium elkanii strain UASWS1015 Contig163, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51817.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
PepSY-associated TM helix domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_832_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19046..19234
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B9100
Uncharacterized protein {ECO:0000313|EMBL:EKS35746.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_832_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19356..19979
DNA (624bp) protein (208aa)
Maf-like protein Nwi_0277 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Y277_NITWN rbh
maf; Maf-like protein; K06287 septum formation protein rbh
Maf-like protein Nwi_0277 {ECO:0000255|HAMAP-Rule:MF_00528}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_832_18
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20648..21526)
DNA (879bp) protein (293aa)
Antirestriction protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TAX1_PARBH
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:ADM08180.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
SCNpilot_cont_750_bf_scaffold_832_19
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21956..25276)
DNA (3321bp) protein (1107aa)
ATPase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1L5_9RHIZ rbh
ATPase {ECO:0000313|EMBL:ESZ05294.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
ATPase -like protein; K06922 rbh
SCNpilot_cont_750_bf_scaffold_832_20
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25296..25859)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GYW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ05293.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein; K07445 putative DNA methylase
SCNpilot_cont_750_bf_scaffold_832_21
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25850..28168)
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037CE197 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX54674.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein; K07445 putative DNA methylase rbh
SCNpilot_cont_750_bf_scaffold_832_22
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28243..31755)
DNA (3513bp) protein (1171aa)
RNA helicase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1A9_9RHIZ rbh
RNA helicase {ECO:0000313|EMBL:ESZ05292.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
helicase domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_832_23
unknown

Not on your lists

comp(31821..32054)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_832_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32661..33428)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DB902 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL11843.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_832_25
unknown

Not on your lists

comp(33722..33919)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_832_26
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34262..35650
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU87_BRASB rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ37420.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_832_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36518..36703
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWT3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX51867.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_832_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36926..37687
DNA (762bp) protein (254aa)
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3E5_9BRAD
DNA ligase D {ECO:0000313|EMBL:EKS32958.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA ligase D
SCNpilot_cont_750_bf_scaffold_832_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37660..38673
DNA (1014bp) protein (338aa)
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3E5_9BRAD
DNA ligase D {ECO:0000313|EMBL:EKS32958.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA ligase D
SCNpilot_cont_750_bf_scaffold_832_30
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38670..39473
DNA (804bp) protein (268aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRF9_9BRAD
XthA protein {ECO:0000313|EMBL:GAN14578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
Displaying items 1-30 of 33 in total

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