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SCNpilot_cont_750_bf_scaffold_4096

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4096_1
unknown

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comp(1..108)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4096_2
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(292..720)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379A92
Uncharacterised protein {ECO:0000313|EMBL:CRD15852.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
SCNpilot_cont_750_bf_scaffold_4096_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1066..1617
DNA (552bp) protein (184aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Heterodimeric methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:ABE63419.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABE63419.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Heterodimeric methylmalonyl-CoA mutase large subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK28_NITHX
SCNpilot_cont_750_bf_scaffold_4096_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1691..2614
DNA (924bp) protein (308aa)
arginine/ornithine transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
Methylmalonyl-CoA mutase metallochaperone MeaB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK26_NITHX
Membrane ATPase/protein kinase {ECO:0000313|EMBL:ETR76054.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_750_bf_scaffold_4096_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2865..3314
DNA (450bp) protein (150aa)
peptidase C15, pyroglutamyl peptidase I; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Peptidase C15, pyroglutamyl peptidase I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK22_NITHX
SCNpilot_cont_750_bf_scaffold_4096_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3584..4846
DNA (1263bp) protein (421aa)
Drug resistance transporter Bcr/CflA subfamily n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK21_NITHX rbh
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
Drug resistance transporter Bcr/CflA subfamily {ECO:0000313|EMBL:ABE63426.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4922..6289
DNA (1368bp) protein (456aa)
Nitrous oxidase accessory protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK20_NITHX rbh
nitrous oxidase accessory protein rbh
Nitrous oxidase accessory protein {ECO:0000313|EMBL:ABE63427.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6378..6878)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK17_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63430.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7152..9032)
DNA (1881bp) protein (627aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK11_NITHX rbh
peptidase S8/S53 subtilisin kexin sedolisin rbh
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABE63436.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9042..9737)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK10_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63437.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9734..10303)
DNA (570bp) protein (190aa)
Sigma-24 (FecI-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK09_NITHX rbh
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
Sigma-24 (FecI-like) {ECO:0000313|EMBL:ABE63438.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10883..11989
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK08_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63439.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12125..12823
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK07_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63440.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_4096_14
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(13260..13619)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) RepID=Q4J9P2_SULAC
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
SCNpilot_cont_750_bf_scaffold_4096_15
unknown

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14523..14624
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 15 items

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