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SCNpilot_cont_750_bf_scaffold_7052

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_7052_1
Nitrosospira sp. TCH716, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..79)
DNA (78bp) protein (26aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=155922 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. (strain TCH716).;"
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosospira sp. (strain TCH716) RepID=RBL_NITST
SCNpilot_cont_750_bf_scaffold_7052_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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311..1243
DNA (933bp) protein (311aa)
Transcriptional regulatory protein, LysR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SR44_NITWN rbh
LysR family transcriptional regulator rbh
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ABA05247.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_7052_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1233..1559)
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II (GlnB, GlnK) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS2_NITHX
nitrogen regulatory protein P-II (GlnB, GlnK)
Nitrogen regulatory protein P-II (GlnB, GlnK) {ECO:0000313|EMBL:ABE64925.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_7052_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1556..4009)
DNA (2454bp) protein (818aa)
UPF0753 protein NB311A_00870 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVW0_9BRAD rbh
UPF0753 protein NB311A_00870 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein; K09822 hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_7052_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4494..5255)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64923.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_7052_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5262..6959)
DNA (1698bp) protein (566aa)
NADH/ubiquinone/plastoquinone (complex I); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFS9_NITHX rbh
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ABE64918.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_7052_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7172..7468
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFT0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64917.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_7052_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7824..8003
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUX9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36235.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_7052_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8810..9211)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQY1_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05310.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_7052_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9297..10103)
DNA (807bp) protein (269aa)
TonB like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X083_9BRAD
TonB like protein {ECO:0000313|EMBL:EAQ34358.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-like protein; K03832 periplasmic protein TonB
SCNpilot_cont_750_bf_scaffold_7052_11
unknown

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comp(10257..10373)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_7052_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10386..10847)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZH0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34620.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_7052_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10910..11524)
DNA (615bp) protein (205aa)
Invasion associated locus B n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZG9_9BRAD
Invasion associated locus B {ECO:0000313|EMBL:EAQ34619.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
invasion associated locus B
Displaying 13 items

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