ggKbase home page

SCNpilot_cont_750_bf_scaffold_3151

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3151_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..734)
DNA (732bp) protein (244aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ISPE_NITHX
SCNpilot_cont_750_bf_scaffold_3151_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(786..2477)
DNA (1692bp) protein (564aa)
Tetratricopeptide TPR_2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIJ5_NITHX rbh
tetratricopeptide TPR_2 rbh
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABE63952.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3151_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2655..4316)
DNA (1662bp) protein (554aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:ABE63953.1}; EC=1.5.5.1 {ECO:0000313|EMBL:ABE63953.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIJ4_NITHX
SCNpilot_cont_750_bf_scaffold_3151_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4503..5339
DNA (837bp) protein (279aa)
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] rbh
Phage SPO1 DNA polymerase-related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIJ3_NITHX rbh
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABE63954.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3151_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5345..6853)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIJ2_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63955.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3151_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6993..7724)
DNA (732bp) protein (244aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] rbh
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribonuclease HII n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RNH2_NITHX rbh
SCNpilot_cont_750_bf_scaffold_3151_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..8257)
DNA (420bp) protein (140aa)
DNA repair photolyase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPD8_NITWN
DNA repair photolyase
DNA repair photolyase {ECO:0000313|EMBL:ABA05853.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_3151_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8277..8933)
DNA (657bp) protein (219aa)
Radical SAM n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIJ0_NITHX
radical SAM family protein
Radical SAM protein {ECO:0000313|EMBL:KIZ41378.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_3151_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9004..9567)
DNA (564bp) protein (188aa)
Molybdopterin binding domain n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QII9_NITHX rbh
molybdopterin binding domain-containing protein; K03638 molybdenum cofactor biosynthesis protein B rbh
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_3151_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9693..10610)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36569.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
zinc metallopeptidase; K07054
SCNpilot_cont_750_bf_scaffold_3151_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11119..11274
DNA (156bp) protein (52aa)
DNA methylase N-4/N-6; K13581 modification methylase [EC:2.1.1.72]
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA methylase N-4/N-6 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QII7_NITHX
Displaying 11 items

View Taxonomy