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SCNpilot_cont_750_bf_scaffold_9624

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_9624_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24..497
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SSRP_NITHX rbh
smpB; SsrA-binding protein; K03664 SsrA-binding protein rbh
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_9624_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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599..1177
DNA (579bp) protein (193aa)
BcpB protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003677211
SsrA-binding protein {ECO:0000256|SAAS:SAAS00023472}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
bcpB; BcpB protein
SCNpilot_cont_750_bf_scaffold_9624_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1386..1547
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVY5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35853.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_9624_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1802..2500)
DNA (699bp) protein (233aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL47_NITHX rbh
uracil-DNA glycosylase superfamily protein rbh
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABE63050.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_9624_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2478..2795)
DNA (318bp) protein (106aa)
Molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCV1_9BRAD
Molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:ERF82608.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_9624_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3343..3735
DNA (393bp) protein (131aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=RPOZ_RHOP5
SCNpilot_cont_750_bf_scaffold_9624_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4031..6283
DNA (2253bp) protein (751aa)
(p)ppGpp synthetase SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYU7_9BRAD
RelA/SpoT protein {ECO:0000313|EMBL:EAQ34844.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_750_bf_scaffold_9624_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6401..7171
DNA (771bp) protein (257aa)
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] rbh
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL51_NITHX rbh
SCNpilot_cont_750_bf_scaffold_9624_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7168..7389
DNA (222bp) protein (74aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYP9_9BRAD
Displaying 9 items

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