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SCNpilot_cont_750_bf_scaffold_1434

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1434_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..303
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VXS8_METEP
Uncharacterized protein {ECO:0000313|EMBL:KFC73390.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419..685)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73394.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1434_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(694..963)
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=2 Tax=Xanthobacteraceae RepID=IF1_AZOC5
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_cont_750_bf_scaffold_1434_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..2578)
DNA (1524bp) protein (508aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
DEAD/DEAH box helicase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034DDCDB
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFC73396.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1434_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2717..2926)
DNA (210bp) protein (70aa)
Putative cold shock protein y4cH n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4V2_RHIFR
Cold shock protein {ECO:0000313|EMBL:KFC73397.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold shock protein y4cH
SCNpilot_cont_750_bf_scaffold_1434_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3198..3692
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003737109
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:EHK56482.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_750_bf_scaffold_1434_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3728..4429)
DNA (702bp) protein (234aa)
UPI0003CF5FD4 related cluster n=1 Tax=unknown RepID=UPI0003CF5FD4
DUMP phosphatase {ECO:0000313|EMBL:KFC73398.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
haloacid dehalogenase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_750_bf_scaffold_1434_8
Peirates atromaculatus, Peirates, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(4444..4998)
DNA (555bp) protein (185aa)
coxB; cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=Chitala lopis RepID=C4IX30_9TELE
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=1457303 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Peiratinae; Peirates.;" source="Peirates atromaculatus.;"
SCNpilot_cont_750_bf_scaffold_1434_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5002..6471)
DNA (1470bp) protein (490aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KFC73400.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KFC73400.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate, phosphate dikinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ43_9RHIZ
SCNpilot_cont_750_bf_scaffold_1434_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6465..7631)
DNA (1167bp) protein (389aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KFC73400.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KFC73400.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
pyruvate phosphate dikinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036553C3
SCNpilot_cont_750_bf_scaffold_1434_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7814..8311)
DNA (498bp) protein (166aa)
Uncharacterized conserved protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR19_AZOC5
UPF0260 protein FG93_01769 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09160 hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8555..10774
DNA (2220bp) protein (740aa)
1A family penicillin-binding protein (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
Penicillin-binding protein, 1A family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF41_METNO rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KFC73402.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1434_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11545..12120
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D79D03
Uncharacterized protein {ECO:0000313|EMBL:KFC73403.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..12785
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000361D00B
Uncharacterized protein {ECO:0000313|EMBL:KFC73404.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12799..13593)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L226_METC4
Uncharacterized protein {ECO:0000313|EMBL:KFC73405.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_16
unknown

Not on your lists

comp(13590..13799)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1434_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13962..15101
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF36_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC73407.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15098..15433)
DNA (336bp) protein (112aa)
Atp-dependent zn protease n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CLQ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73408.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1434_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15450..16028)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73409.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1434_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16039..17844)
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3); K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] rbh
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF33_METNO rbh
SCNpilot_cont_750_bf_scaffold_1434_21
unknown

Not on your lists

18164..18280
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 21 items

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